Strain

Uganda_R7_2015 (Region: Uganda, Tororo district; Strain: R7; Date: 2015)

Gene

pF165R

Description

Annotated in NCBI, pF165R

Location

MH025917.1(+):58090-58587

GenBank Accession

AXB49449.1

Full name

Uncharacterized protein F165R

CDS

ATGGCAAACCCCAGCAAGAGGATAATGAATAAAAAAAGTAAACAGGCATCCATTAGTTCCATATTAAATTTTTTTTTCTTCTATATAATGGAATATTTTGTTGCGGTAGACAATGAAACCCCCTTGGGGGTTTTTACTTCCATGGAGCAATGCGAGGAAACGATGAAACAATACCCCGGCCTCCATTACGTCGTTTTTAAGTATACGTGTCCGGCGGACGCAGAAAATACAGATGTTGTATATTTAATACCCTCGTTAACCTTGCACACCCCCATGTTTGTAGACCACTGCCCGAACCGTACTAAACAAGCACGACATGTATTGAAAAAAATAAACTTAGTGTTCGAAGAAGAATCTATTGAAACTTGGAAGGTTTCAGTAAATACTGTGTTCCCTCACGTTCACAATAGATTATCTGCGCCGAAACTTTCCATCGACGAGGCCAATGAAGCCGTAGAAAAGTTTTTGATACAGGCAGGGCGACTCATGTCTCTATAA

Protein

MANPSKRIMNKKSKQASISSILNFFFFYIMEYFVAVDNETPLGVFTSMEQCEETMKQYPGLHYVVFKYTCPADAENTDVVYLIPSLTLHTPMFVDHCPNRTKQARHVLKKINLVFEEESIETWKVSVNTVFPHVHNRLSAPKLSIDEANEAVEKFLIQAGRLMSL

Similarity

Belongs to the asfivirus F165R family.

Keywords

Complete proteome Host membrane Membrane Transmembrane Transmembrane helix Reference proteome

Feature

chain Uncharacterized protein F165R

Uniprot

A0A0C5AZX8 P0CA66 A9JKY9 D4I5N4 A9JLQ0 A0A0A1E3H5 + More
Q65145 A0A0C5AZD7 P0CA69 P0CA68 P0CA67 E0WMI4 A0A2X0RVC5

Pubmed

25645905 18198370 25406173 26618713 11831707 21470447 + More

EMBL

KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 + More
AJL34225.1 AXB49275.1 AXB49449.1 AXB49621.1 AXB49792.1 AXB49965.1 AY261360 AM712239 CAN10145.1 FN557520 CBH29147.1 AM712240 CAN10394.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22237.1 AIY22396.1 AJZ77149.1 AKO62728.1 AOO54377.1 U18466 KM111294 AJL34060.1 AY261366 AY261363 AY261361 FR682468 CBW46712.1 MG939583 MG939587 MG939588 LS478113 AXZ95822.1 AXZ96010.1 AXZ96105.1 SPS73469.1

Proteomes

UP000101566 UP000000861 UP000130745 UP000101090 UP000108903 UP000110401 + More
UP000117635 UP000142390 UP000241813 UP000266411 UP000000624 UP000105860 UP000000858 UP000000859 UP000000860 UP000141072

ProteinModelPortal

A0A0C5AZX8 P0CA66 A9JKY9 D4I5N4 A9JLQ0 A0A0A1E3H5 + More
Q65145 A0A0C5AZD7 P0CA69 P0CA68 P0CA67 E0WMI4 A0A2X0RVC5

PDB

6G2I E-value=7.30353, Score=72

Ontologies

KEGG

vg:22220428

GO

GO:0016021 C:integral component of membrane
GO:0033644 C:host cell membrane

Subcellular Location

From MSLVP

Capsid

From Uniprot

Host membrane

Topology

Length:

165

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

18.00839

Exp number, first 60 AAs:

17.84002

Total prob of N-in:

0.92968

POSSIBLE N-term signal

sequence

inside

1 - 16

TMhelix

17 - 36

outside

37 - 165

Population Genetic Test Statistics

Pi

0.0305643

Theta

0.0364103

Tajima's D

-0.5343091

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62728.1
China_AnhuiXCGQ_2018	Protein	AYW34018.1
China_ASFV-SY18_2018
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95822.1
Poland_Pol16_20538_o9_2016-2017
Poland_Pol16_20540_o10_2016-2017
Poland_Pol16_29413_o23_2016-2017
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ96010.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96105.1
Poland_Pol17_05838_C220_2016-2017
Poland_ASFV_POL_Podlaskie_2015
Uganda_R8_2015	Protein	AXB49275.1
Uganda_R7_2015	Protein	AXB49449.1
Uganda_R25_2015	Protein	AXB49621.1
Uganda_N10_2015	Protein	AXB49792.1
Uganda_R35_2015	Protein	AXB49965.1
Estonia_2014	Protein	SPS73469.1
Italy_26544_OG10_2010	Protein	AJZ77149.1
Italy_47_Ss_2008_2008	Protein	AOO54377.1
Portugal_OURT_88.3_1988	Protein	CAN10394.1
Spain_E75_1975	Protein	CBH29147.1
Russia_Georgia_2007	Protein	CBW46712.1
Kenya_Tk1_2005	Protein	AJL34060.1
Kenya_Bus_2006	Protein	AJL34225.1
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22237.1
Portugal_NHV_1968	Protein	AIY22396.1
Russia_Kashino_2013
Benin_1997	Protein	CAN10145.1
South_Africa_KNP_Pretorisuskop_1996
South_Africa_MGR_Mkuzi_1979
Malawi_Lil_1983
Kenya_1950
Namibia_Warthog_1980
South_Africa_Warmbaths_1987
Malawi_Tengani_1962
China_HLJ_2018	Protein	QBH90534.1
China_LN_2018	Protein	QBH90719.1
China_wbBS01_2018	Protein	QDL88077.1
Ukraine_Kyiv_2014	Protein	QED21603.1
Belgium_Etalle_wb_2018	Protein	QED90489.1
Lithuania_LT14_2014	Protein	QEY87852.1
South_Africa_1985	Protein Protein	QGM12902.1 QGM12902.1
South_Africa_2_2008	Protein	QGM12828.1
Zambia_LIV_1983	Protein Protein	QGM12708.1 QGM12709.1

Sequence