Strain

China_HLJ_2018 (Region: China, Heilongjiang; Strain: Pig/HLJ/2018; Date: 2018)

Gene

I177L

Description

Annotated in NCBI, I177L

Location

MK333180.1(-):174523-174723

GenBank Accession

QBH90630.1

Full name

Membrane protein I177L

CDS

ATGTGGAAAGTTAATGATCAGGGCTTTTTAAATATTAGTGTTACTGGTACCAAATTTAACTTAATAGCCATTACCGGCAAGCTAGGATTTTATACGGATCCCCCTTCGCATTTGATAATTATGCCGTTAAAGTTTTTTCCAGTTCATAAATTTAGTAAAAATGAACCCAATAAAAAACAAAAGAGGTTCATCTACTTTTAA

Protein

MWKVNDQGFLNISVTGTKFNLIAITGKLGFYTDPPSHLIIMPLKFFPVHKFSKNEPNKKQKRFIYF

Similarity

Belongs to the asfivirus I177L family.

Keywords

Complete proteome Glycoprotein Host membrane Late protein Membrane Transmembrane Transmembrane helix Reference proteome

Feature

chain Membrane protein I177L

Uniprot

E0WM92 A0A385KN42 A0A2X0THZ4 P0CA82 A9JLE2 D4I5G6 + More
A9JM75 A0A0A1E0U2 P27942 P0CA83

Pubmed

21470447 18198370 25406173 26618713 1309282

EMBL

FR682468 CBW46808.1 MG939583 MG939588 AXZ95913.1 AXZ96196.1 + More
LS478113 SPS73565.1 AY261363 AM712239 CAN10241.1 FN557520 CBH29242.1 AM712240 CAN10491.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22333.1 AIY22491.1 AJZ77141.1 AKO62823.1 AOO54514.1 U18466 M77121 AY261366

Proteomes

UP000141072 UP000000859 UP000130745 UP000101090 UP000108903 UP000110401 + More
UP000117635 UP000142390 UP000241813 UP000266411 UP000000624 UP000000858

ProteinModelPortal

E0WM92 A0A385KN42 A0A2X0THZ4 P0CA82 A9JLE2 D4I5G6 + More
A9JM75 A0A0A1E0U2 P27942 P0CA83

PDB

6OSX E-value=0.284755, Score=74

Ontologies

KEGG

vg:22220371

GO

GO:0016021 C:integral component of membrane
GO:0033644 C:host cell membrane

Subcellular Location

From MSLVP

Single-Pass Membrane

From Uniprot

Host membrane
Membrane

Topology

Length:

66

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.4983

Exp number, first 60 AAs:

3.4983

Total prob of N-in:

0.48238

outside

1 - 66

Population Genetic Test Statistics

Pi

0.0678002

Theta

0.0778374

Tajima's D

-0.5078436

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62823.1
China_AnhuiXCGQ_2018	Protein Protein	CAN10241.1 AYW34113.1
China_ASFV-SY18_2018	Protein Protein	CBW46808.1 CBW46809.1
Poland_Pol16_20186_o7_2016-2017	Protein Protein	CAN10241.1 AXZ95913.1
Poland_Pol16_20538_o9_2016-2017
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10241.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10241.1
Poland_Pol17_03029_C201_2016-2017	Protein	CAN10241.1
Poland_Pol17_04461_C210_2016-2017	Protein Protein	CAN10241.1 AXZ96196.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10241.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10241.1
Uganda_R8_2015
Uganda_R7_2015
Uganda_R25_2015
Uganda_N10_2015
Uganda_R35_2015
Estonia_2014	Protein	SPS73565.1
Italy_26544_OG10_2010	Protein	AJZ77141.1
Italy_47_Ss_2008_2008	Protein	AOO54514.1
Portugal_OURT_88.3_1988	Protein	CAN10491.1
Spain_E75_1975	Protein	CBH29242.1
Russia_Georgia_2007	Protein Protein	CBW46808.1 CBW46809.1
Kenya_Tk1_2005	Protein	AJL34154.1
Kenya_Bus_2006
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22333.1
Portugal_NHV_1968	Protein	AIY22491.1
Russia_Kashino_2013	Protein	CAN10241.1
Benin_1997	Protein Protein	CAN10241.1 CAN10241.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10241.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10241.1
Malawi_Lil_1983	Protein	CAN10241.1
Kenya_1950	Protein	CAN10241.1
Namibia_Warthog_1980	Protein	CAN10241.1
South_Africa_Warmbaths_1987	Protein	CAN10241.1
Malawi_Tengani_1962	Protein	CAN10241.1
China_HLJ_2018	Protein Protein	QBH90630.1 QBH90631.1
China_LN_2018	Protein Protein	QBH90815.1 QBH90816.1
China_wbBS01_2018	Protein Protein	QDL88173.1 QDL88174.1
Ukraine_Kyiv_2014	Protein	QED21758.1
Belgium_Etalle_wb_2018	Protein Protein	CAN10241.1 QED90585.1
Lithuania_LT14_2014	Protein	QEY87948.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983

Sequence