Strain

Poland_Pol17_05838_C220_2016-2017 (Region: Poland; Strain: Pol17_05838_C220; Date: 2016-2017)

Gene

pI177L

Description

Annoated by sequence mapping, putative transmembrane protein

Location

MG939589.1(-):174512-175045

GenBank Accession

CAN10241.1

Full name

Membrane protein I177L

CDS

ATGTATGAAATTATTTTGGCGATTATTATCATACTTTTAACAATTATTATTTTTTATTTTTATAAAACACCCTTTAAATGTATAACGACAACTAAAACCCCTGTACTATTTATAAAATTTCAACTCATTGCTGCGGATAATTATCAAGCTATTACGTGGAAAGATGGAATATTAAACTATGAGAAAATAGATCAACCCACTCCTCTATATCTTAGTGTTAATGGGCTTATTTTTGATTGTGCCAAGCTTCAGCCACTAACAACCAAATCAAATGTAACATCTGGTGACAAAGTTGTCCATATTGGACAAACATTCGAATATAATAATCTTTTAATGTGGAAAGTTAATGATCAGGGCTTTTTAAATATTAGTGTTACTGGTACCAAATTTAACTTAATAGCCATTACCGGCAAGCTAGGATTTTATACGGATCCCCCTTCGCATTTGATAATTATGCCGTTAAAGTTTTTTCCAGTTCATAAATTTAGTAAAAATGAACCCAATAAAAAACAAAAGAGGTTCATCTACTTTTAA

Protein

MYEIILAIIIILLTIIIFYFYKTPFKCITTTKTPVLFIKFQLIAADNYQAITWKDGILNYEKIDQPTPLYLSVNGLIFDCAKLQPLTTKSNVTSGDKVVHIGQTFEYNNLLMWKVNDQGFLNISVTGTKFNLIAITGKLGFYTDPPSHLIIMPLKFFPVHKFSKNEPNKKQKRFIYF

Similarity

Belongs to the asfivirus I177L family.

Keywords

Complete proteome Glycoprotein Late protein Membrane Reference proteome Transmembrane Transmembrane helix Host membrane

Feature

chain Membrane protein I177L

Uniprot

A9JLE2 D4I5G6 A9JM75 A0A0A1E0U2 P27942 P0CA82 + More
A0A2X0THZ4 P0CA83 A0A0C5AWG3 P0CA80 A0A0C5BCW3 A0A2Z5DFW7 P0CA81

Pubmed

18198370 25406173 26618713 1309282 25645905

EMBL

AM712239 CAN10241.1 FN557520 CBH29242.1 AM712240 CAN10491.1 + More
KM262844 KM262845 KM102979 KP055815 KX354450 AIY22333.1 AIY22491.1 AJZ77141.1 AKO62823.1 AOO54514.1 U18466 M77121 AY261363 LS478113 SPS73565.1 AY261366 KM111294 AJL34154.1 AY261360 KM111295 MH025916 MH025917 MH025918 MH025920 AJL34318.1 AXB49370.1 AXB49544.1 AXB49716.1 AXB50060.1 MH025919 AXB49887.1 AY261361

Proteomes

UP000130745 UP000101090 UP000108903 UP000110401 UP000117635 UP000142390 + More
UP000241813 UP000266411 UP000000624 UP000000859 UP000000858 UP000105860 UP000000861 UP000101566 UP000000860

ProteinModelPortal

A9JLE2 D4I5G6 A9JM75 A0A0A1E0U2 P27942 P0CA82 + More
A0A2X0THZ4 P0CA83 A0A0C5AWG3 P0CA80 A0A0C5BCW3 A0A2Z5DFW7 P0CA81

PDB

6OSX E-value=0.284755, Score=74

Ontologies

KEGG

vg:22220371

GO

GO:0016021 C:integral component of membrane
GO:0033644 C:host cell membrane

Subcellular Location

From MSLVP

Single-Pass Membrane

From Uniprot

Membrane
Host membrane

Topology

Length:

177

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.45217

Exp number, first 60 AAs:

18.47243

Total prob of N-in:

0.01614

POSSIBLE N-term signal

sequence

outside

1 - 3

TMhelix

4 - 21

inside

22 - 177

Population Genetic Test Statistics

Pi

0.0700713

Theta

0.0796434

Tajima's D

-0.5479577

CLR

0.66792

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62823.1
China_AnhuiXCGQ_2018	Protein Protein	CAN10241.1 AYW34113.1
China_ASFV-SY18_2018	Protein Protein	CBW46808.1 CBW46809.1
Poland_Pol16_20186_o7_2016-2017	Protein Protein	CAN10241.1 AXZ95913.1
Poland_Pol16_20538_o9_2016-2017
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10241.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10241.1
Poland_Pol17_03029_C201_2016-2017	Protein	CAN10241.1
Poland_Pol17_04461_C210_2016-2017	Protein Protein	CAN10241.1 AXZ96196.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10241.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10241.1
Uganda_R8_2015
Uganda_R7_2015
Uganda_R25_2015
Uganda_N10_2015
Uganda_R35_2015
Estonia_2014	Protein	SPS73565.1
Italy_26544_OG10_2010	Protein	AJZ77141.1
Italy_47_Ss_2008_2008	Protein	AOO54514.1
Portugal_OURT_88.3_1988	Protein	CAN10491.1
Spain_E75_1975	Protein	CBH29242.1
Russia_Georgia_2007	Protein Protein	CBW46808.1 CBW46809.1
Kenya_Tk1_2005	Protein	AJL34154.1
Kenya_Bus_2006
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22333.1
Portugal_NHV_1968	Protein	AIY22491.1
Russia_Kashino_2013	Protein	CAN10241.1
Benin_1997	Protein Protein	CAN10241.1 CAN10241.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10241.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10241.1
Malawi_Lil_1983	Protein	CAN10241.1
Kenya_1950	Protein	CAN10241.1
Namibia_Warthog_1980	Protein	CAN10241.1
South_Africa_Warmbaths_1987	Protein	CAN10241.1
Malawi_Tengani_1962	Protein	CAN10241.1
China_HLJ_2018	Protein Protein	QBH90630.1 QBH90631.1
China_LN_2018	Protein Protein	QBH90815.1 QBH90816.1
China_wbBS01_2018	Protein Protein	QDL88173.1 QDL88174.1
Ukraine_Kyiv_2014	Protein	QED21758.1
Belgium_Etalle_wb_2018	Protein Protein	CAN10241.1 QED90585.1
Lithuania_LT14_2014	Protein	QEY87948.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983

Sequence