ASFVdb The African Swine Fever Virus Database
Strain
Poland_Pol17_04461_C210_2016-2017 (Region: Poland;  Strain: Pol17_04461_C210;  Date: 2016-2017)
Gene
NP868R
Description
Annotated in NCBI,  protein synthesis: early
GenBank Accession
Full name
Probable mRNA-capping enzyme      
 

Sequence

CDS
ATGGCTTCTTTAGATAATTTAGTGGCACGATATCAGAGGTGCTTTAATGACCAGTCTCTTAAAAATAGTACTATTGAACTTGAAATACGTTTTCAACAGATAAATTTTTTATTATTCAAAACCGTATATGAGGCACTTGTGGCACAAGAGATCCCTAGCACCATCTCCCACAGCATCCGCTGCATCAAAAAAGTTCACCATGAAAACCACTGCCGGGAAAAAATTTTGCCGTCGGAAAATCTTTACTTCAAAAAACAGCCTCTCATGTTTTTTAAGTTTTCAGAGCCTGCATCTCTGGGCTGTAAGGTCTCGCTGGCCATCGAGCAGCCCATTCGTAAATTTATCTTGGACTCCTCCATTCTCGTTCGGCTCAAAAATCGTACGACCTTTCGGGTATCTGAACTTTGGAAAATAGAGCTTACCATTGTAAAGCAGCTGATGGGAAGCGAGGTCTCTGCAAAACTTGCCGCTTTCAAAACGCTTCTGTTTGACACCCCAGAGCAACAAACGACAAAAAATATGATGACGTTAATAAACCCAGATGACGAATATCTTTACGAAATAGAAATAGAGTATACAGGAAAGCCCGAATCCCTAACGGCGGCAGATGTTATAAAAATTAAAAACACGGTGTTGACACTTATTTCTCCAAACCATTTAATGCTAACAGCCTACCACCAGGCCATTGAATTCATTGCCTCCCATATACTGTCCTCAGAAATCCTTCTTGCTCGTATTAAGAGCGGGAAGTGGGGGCTTAAACGCCTCCTCCCCCAGGTGAAATCCATGACCAAAGCGGATTACATGAAATTTTATCCGCCCGTTGGCTACTATGTAACGGACAAAGCAGATGGAATTAGAGGCATCGCCGTCATTCAGGACACGCAAATTTATGTGGTTGCAGACCAGTTATACAGCCTAGGTACCACCGGCATTGAACCCCTTAAACCAACCATTTTGGACGGTGAATTTATGCCTGAAAAAAAAGAATTTTATGGGTTTGACGTCATCATGTATGAGGGCAATCTATTGACGCAACAGGGGTTTGAAACAAGAATTGAGTCTTTAAGCAAGGGCATTAAAGTCTTACAAGCGTTTAACATAAAAGCAGAAATGAAGCCCTTTATTTCGCTAACAAGTGCAGATCCCAACGTGCTCCTCAAAAACTTTGAAAGCATTTTTAAGAAAAAAACTCGCCCATATTCTATTGATGGCATCATTTTAGTAGAACCTGGCAATTCTTATCTAAATACAAACACCTTTAAGTGGAAGCCCACCTGGGATAACACATTAGACTTTTTGGTGCGAAAATGTCCGGAGAGTTTAAACGTACCAGAGTACGCGCCCAAAAAAGGGTTTTCCCTGCATCTACTATTTGTAGGCATCTCCGGAGAGCTTTTTAAAAAATTAGCGCTAAATTGGTGTCCAGGATATACGAAACTATTCCCCGTTACACAGCGCAACCAAAACTACTTTCCAGTACAGTTCCAGCCATCGGATTTTCCATTGGCATTTCTTTATTACCACCCAGATACCTCGTCATTTTCTAATATAGATGGAAAGGTCCTTGAAATGCGTTGTCTTAAGAGAGAAATCAATCACGTCAGCTGGGAAATTGTAAAAATCCGGGAGGATAGGCAGCAGGATCTTAAAACCGGCGGGTATTTTGGCAATGATTTCAAAACAGCCGAACTCACATGGCTTAACTATATGGATCCCTTTTCCTTTGAGGAGCTGGCAAAGGGCCCTTCTGGAATGTACTTCGCCGGTGCCAAAACCGGCATATACCGCGCTCAAACAGCACTTATTTCCTTTATTAAACAAGAAATCATCCAAAAAATAAGTCACCAATCCTGGGTTATCGATCTTGGAATAGGAAAAGGGCAGGACCTAGGACGTTACCTGGACGCAGGGATAAGGCATCTTGTTGGGATCGATAAGGATCAAACCGCGCTTGCGGAGCTTGTTTATCGAAAATTTTCGCATGCTACGACCCGACAGCACAAGCACGCTACCAACATTTACGTGTTGCATCAAGACCTCGCAGAGCCTGCGAAAGAAATCAGCGAAAAGGTACACCAAATTTACGGGTTTCCCAAGGAGGGAGCTTCTTCCATTGTTAGCAACCTGTTTATTCACTATCTTATGAAAAACACGCAGCAGGTGGAAAACCTGGCCGTTCTGTGCCATAAGCTTCTTCAGCCGGGGGGAATGGTGTGGTTTACCACCATGTTGGGAGAACAGGTCTTAGAATTACTTCATGAAAATAGAATAGAGCTCAATGAAGTATGGGAGGCTCGTGAAAACGAAGTGGTCAAATTTGCTATTAAACGTCTCTTTAAAGAGGATATATTACAGGAAACTGGGCAAGAAATTGGAGTCCTGTTACCCTTCAGCAATGGCGACTTCTACAATGAATATCTTGTGAACACAGCGTTTTTAATTAAAATATTTAAACATCACGGCTTTTCCCTAGTTCAAAAGCAGTCCTTTAAGGACTGGATTCCAGAATTTCAAAACTTTAGTAAAAGTTTGTATAAAATTCTTACAGAAGCCGATAAAACTTGGACAAGCCTTTTTGGGTTTATTTGTCTGCGCAAAAATTAA
Protein
MASLDNLVARYQRCFNDQSLKNSTIELEIRFQQINFLLFKTVYEALVAQEIPSTISHSIRCIKKVHHENHCREKILPSENLYFKKQPLMFFKFSEPASLGCKVSLAIEQPIRKFILDSSILVRLKNRTTFRVSELWKIELTIVKQLMGSEVSAKLAAFKTLLFDTPEQQTTKNMMTLINPDDEYLYEIEIEYTGKPESLTAADVIKIKNTVLTLISPNHLMLTAYHQAIEFIASHILSSEILLARIKSGKWGLKRLLPQVKSMTKADYMKFYPPVGYYVTDKADGIRGIAVIQDTQIYVVADQLYSLGTTGIEPLKPTILDGEFMPEKKEFYGFDVIMYEGNLLTQQGFETRIESLSKGIKVLQAFNIKAEMKPFISLTSADPNVLLKNFESIFKKKTRPYSIDGIILVEPGNSYLNTNTFKWKPTWDNTLDFLVRKCPESLNVPEYAPKKGFSLHLLFVGISGELFKKLALNWCPGYTKLFPVTQRNQNYFPVQFQPSDFPLAFLYYHPDTSSFSNIDGKVLEMRCLKREINHVSWEIVKIREDRQQDLKTGGYFGNDFKTAELTWLNYMDPFSFEELAKGPSGMYFAGAKTGIYRAQTALISFIKQEIIQKISHQSWVIDLGIGKGQDLGRYLDAGIRHLVGIDKDQTALAELVYRKFSHATTRQHKHATNIYVLHQDLAEPAKEISEKVHQIYGFPKEGASSIVSNLFIHYLMKNTQQVENLAVLCHKLLQPGGMVWFTTMLGEQVLELLHENRIELNEVWEARENEVVKFAIKRLFKEDILQETGQEIGVLLPFSNGDFYNEYLVNTAFLIKIFKHHGFSLVQKQSFKDWIPEFQNFSKSLYKILTEADKTWTSLFGFICLRKN

Summary

Function
Catalyzes the second reaction in the mRNA cap formation pathway.
Catalytic Activity
a 5'-triphospho-(purine-ribonucleotide)-[mRNA] + H2O = a 5'-diphospho-(purine-ribonucleotide)-[mRNA] + H(+) + phosphate
a 5'-diphospho-(purine-ribonucleotide)-[mRNA] + GTP + H(+) = a 5'-(5'-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA] + diphosphate
a 5'-(5'-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA] + S-adenosyl-L-methionine = a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(purine-ribonucleotide)-[mRNA] + S-adenosyl-L-homocysteine
Similarity
In the N-terminal section; belongs to the dsDNA virus mRNA guanylyltransferase family.
In the C-terminal section; belongs to the class I-like SAM-binding methyltransferase superfamily. mRNA cap 0 methyltransferase family.
Keywords
Complete proteome   GTP-binding   Hydrolase   Methyltransferase   mRNA capping   mRNA processing   Nucleotide-binding   Nucleotidyltransferase   RNA-binding   S-adenosyl-L-methionine   Transferase   Reference proteome  
Feature
chain  Probable mRNA-capping enzyme
Pfam
PF01331   mRNA_cap_enzyme
PF03291   Pox_MCEL
Interpro
IPR029063   SAM-dependent_MTases
IPR004971   mRNA_G-N7_MeTrfase_dom
IPR033469   CYTH-like_dom_sf
IPR001339   mRNA_cap_enzyme
SUPFAM
SSF53335   SSF53335
SSF55154   SSF55154
PDB
2HV9     E-value=6.37495e-06,     Score=123

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
868
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02014
Exp number, first 60 AAs:
0.00206
Total prob of N-in:
0.00043
outside
1  -  868
 
 

Population Genetic Test Statistics

Pi
0.0281371
Theta
0.0375481
Tajima's D
-0.922338
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62782.1
China_AnhuiXCGQ_2018 Protein
AYW34072.1
China_ASFV-SY18_2018 Protein
AKO62782.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95875.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10200.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10200.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10200.1
Poland_Pol17_03029_C201_2016-2017 Protein
CAN10200.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96158.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10200.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10200.1
Uganda_R8_2015 Protein
AXB49329.1
Uganda_R7_2015 Protein
AXB49503.1
Uganda_R25_2015 Protein
AXB49675.1
Uganda_N10_2015 Protein
AXB49846.1
Uganda_R35_2015 Protein
AXB50019.1
Estonia_2014 Protein
SPS73524.1
Italy_26544_OG10_2010 Protein
AJZ77049.1
Italy_47_Ss_2008_2008 Protein
AOO54458.1
Portugal_OURT_88.3_1988 Protein
CAN10450.1
Spain_E75_1975 Protein
CBH29201.1
Russia_Georgia_2007 Protein
CBW46767.1
Kenya_Tk1_2005 Protein
AJL34114.1
Kenya_Bus_2006 Protein
AJL34279.1
Russia_Odintsovo_2014 Protein
CAN10200.1
Portugal_L60_1960 Protein
AIY22292.1
Portugal_NHV_1968 Protein
AIY22450.1
Russia_Kashino_2013 Protein
CAN10200.1
Benin_1997 Protein
Protein
CAN10200.1
CAN10200.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10200.1
South_Africa_MGR_Mkuzi_1979 Protein
CAN10200.1
Malawi_Lil_1983 Protein
CAN10200.1
Kenya_1950 Protein
CAN10200.1
Namibia_Warthog_1980 Protein
CAN10200.1
South_Africa_Warmbaths_1987 Protein
CAN10200.1
Malawi_Tengani_1962 Protein
CAN10200.1
China_HLJ_2018 Protein
QBH90589.1
China_LN_2018 Protein
QBH90774.1
China_wbBS01_2018 Protein
QDL88132.1
Ukraine_Kyiv_2014 Protein
QED21701.1
Belgium_Etalle_wb_2018 Protein
QED90544.1
Lithuania_LT14_2014 Protein
QEY87907.1
South_Africa_1985 Protein
QGM12928.1
South_Africa_2_2008 Protein
QGM12854.1
Zambia_LIV_1983    
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