Strain

Poland_Pol16_20186_o7_2016-2017 (Region: Poland; Strain: Pol16_20186_o7; Date: 2016-2017)

Gene

MGF_110-14L

Description

Annotated in NCBI, CBH29107.1

Location

MG939583.1(-):13265-13615

GenBank Accession

AXZ95785.1

CDS

ATGAAGGTTCTAGGACTTTTGTTGGGCTACTCAGTCCTCATTCTTGCACATGAATTACCAGAATTACCAAGAACCCAGCATCCTCCTAAGGAGGAGCTTCCATATTGGTGTACGTATGTAAAGAATTGTGACTTCTGCTGGGATTGTCAAAATGGCATTTGTAAAAATAAGATAACAAATGAGTCTAATTCGATGAATTCGATTGTAAACTGTATAGTTAATCGCAATTCCTGGGGGTGTTTTTATGAAATATCAGTTAAAATGCCTAATCATCATAACATGGAGTGTTCACATCCTAGACCCTATACAGGAAATGAAATATTCATGGAAAAATGGGGGGGGGGGGGGTGA

Protein

MKVLGLLLGYSVLILAHELPELPRTQHPPKEELPYWCTYVKNCDFCWDCQNGICKNKITNESNSMNSIVNCIVNRNSWGCFYEISVKMPNHHNMECSHPRPYTGNEIFMEKWGGGG

Uniprot

NA

ProteinModelPortal

NA

PDB

4ZJC E-value=0.041904, Score=84

Ontologies

Subcellular Location

From MSLVP

Multi-Pass Membrane

Topology

Length:

116

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0363100000000001

Exp number, first 60 AAs:

0.03602

Total prob of N-in:

0.02965

outside

1 - 116

Population Genetic Test Statistics

Pi

0.1447459

Theta

0.2242002

Tajima's D

-1.5063092

CLR

2.12319

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971
China_AnhuiXCGQ_2018	Protein Protein Protein	AYW33965.1 AYW33966.1 AYW33967.1
China_ASFV-SY18_2018	Protein Protein Protein Genetic Remain	CBW46664.1 CBH29107.1 CAN10108.1 CBW46668.1
Poland_Pol16_20186_o7_2016-2017	Protein Protein Protein	AXZ95784.1 AXZ95785.1 AXZ95787.1
Poland_Pol16_20538_o9_2016-2017	Protein Protein Protein	AXZ95937.1 AXZ95938.1 AXZ95940.1
Poland_Pol16_20540_o10_2016-2017	Protein	AIY22367.1
Poland_Pol16_29413_o23_2016-2017	Protein Protein	AIY22367.1 AXZ95964.1
Poland_Pol17_03029_C201_2016-2017	Protein Protein	AIY22367.1 AXZ95981.1
Poland_Pol17_04461_C210_2016-2017	Protein Protein	AIY22367.1 AXZ96076.1
Poland_Pol17_05838_C220_2016-2017	Protein	AIY22367.1
Poland_ASFV_POL_Podlaskie_2015	Protein	AIY22367.1
Uganda_R8_2015	Protein Protein Protein Protein	AIY22367.1 AXB49236.1 AXB49237.1 AXB49240.1
Uganda_R7_2015	Protein Protein Protein Protein	AIY22367.1 AXB49410.1 AXB49411.1 AXB49414.1
Uganda_R25_2015	Protein Protein	AXB49583.1 AXB49586.1
Uganda_N10_2015	Protein Protein Protein Protein	AIY22367.1 AXB49755.1 AXB49756.1 AXB49759.1
Uganda_R35_2015	Protein Protein Protein Protein	AIY22367.1 AXB49926.1 AXB49927.1 AXB49930.1
Estonia_2014	Protein	SPS73426.1
Italy_26544_OG10_2010	Protein Protein Protein	AIY22367.1 AJZ77108.1 AJZ77154.1
Italy_47_Ss_2008_2008	Protein Protein Protein	AOO54318.1 AOO54319.1 AOO54323.1
Portugal_OURT_88.3_1988	Protein Protein	CAN10364.1 CAN10365.1
Spain_E75_1975	Protein Protein Protein	CBH29106.1 CBH29107.1 CBH29109.1
Russia_Georgia_2007	Protein Protein Protein	CBW46664.1 CBW46665.1 CBW46668.1
Kenya_Tk1_2005	Protein Protein Protein	AJL34023.1 AJL34024.1 AJL34026.1
Kenya_Bus_2006	Protein Protein Protein	AJL34186.1 AJL34187.1 AJL34190.1
Russia_Odintsovo_2014	Protein	AIY22367.1
Portugal_L60_1960	Protein Protein Protein	AIY22196.1 AIY22197.1 AIY22200.1
Portugal_NHV_1968	Protein Protein Protein	AIY22367.1 AIY22366.1 AIY22367.1
Russia_Kashino_2013	Protein	AIY22367.1
Benin_1997	Protein Protein	CAN10105.1 CAN10108.1
South_Africa_KNP_Pretorisuskop_1996
South_Africa_MGR_Mkuzi_1979	Protein	AIY22367.1
Malawi_Lil_1983	Protein	AIY22367.1
Kenya_1950	Protein	AIY22367.1
Namibia_Warthog_1980	Protein	AIY22367.1
South_Africa_Warmbaths_1987	Protein	AIY22367.1
Malawi_Tengani_1962
China_HLJ_2018	Protein Protein Protein	QBH90487.1 QBH90488.1 QBH90491.1
China_LN_2018	Protein Protein Protein	QBH90672.1 QBH90673.1 QBH90676.1
China_wbBS01_2018	Protein Protein Protein	QDL88029.1 QDL88030.1 QDL88033.1
Ukraine_Kyiv_2014	Protein Protein Protein	QED21556.1 QED21557.1 QED21559.1
Belgium_Etalle_wb_2018	Protein Protein	AIY22367.1 QED90444.1
Lithuania_LT14_2014	Protein Protein Protein	QEY87803.1 QEY87804.1 QEY87808.1
South_Africa_1985
South_Africa_2_2008	Protein	AJZ77135.1
Zambia_LIV_1983

Sequence