Strain
South_Africa_Warmbaths_1987
(Region: South Africa, Warmbaths; Strain: Warmbaths; Date: 1987)
Gene
hypothetical protein ASFV_Kyiv_2016_131_00173
Description
With frameshift mutation but translatable,
hypothetical protein
Location
GenBank Accession
Sequence
CDS
ATGGCGTATCCCGAATTGGATGCCGCAGACTTTTTGCAGCAGTTGGCGCGAAGAAAGGAGTTTAAGTCGTTGATTTCCCCTCCTGTCGACCAAAAAGAGCTCATTCGTGATCTGCGGGCTCATTTTGTCCAGATCGGTGGGCCTGGCTGCGAGAAGGGGGGGCGAGCGTTTTTTCCGTGTGACCCCTACGCGTCGCCCTTTCCTTCCATCAAGGGTCTCCAATTGCATAATGCCCAGCTTTTCGTCCAAAACTTTCAAAACCCCAACACGCCCTACTCGCGTCTTTTATTA
Protein
MAYPELDAADFLQQLARRKEFKSLISPPVDQKELIRDLRAHFVQIGGPGCEKGGRAFFPCDPYASPFPSIKGLQLHNAQLFVQNFQNPNTPYSRLLL
Summary
Uniprot
EMBL
Proteomes
ProteinModelPortal
PDB
6RFL
E-value=2.26771e-07,
Score=136
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
97
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.14946
outside
1 - 97
Population Genetic Test Statistics
Pi
0.0278195
Theta
0.0318608
Tajima's D
-0.4199874
CLR
0
Interpretation
No evidence of Selection
Multiple alignment of Orthologues
Gene Tree
Orthologous in Strains
| Strain | Availability | Status | Gene |
|---|---|---|---|
| Spain_BA71_1971 |
Protein Protein Protein |
QED21706.1 QED21709.1 AKO62787.1 |
|
| China_AnhuiXCGQ_2018 |
Protein Protein Protein |
QED21706.1 QED21709.1 AYW34077.1 |
|
| China_ASFV-SY18_2018 |
Protein |
AKO62787.1 |
|
| Poland_Pol16_20186_o7_2016-2017 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXZ95880.1 |
|
| Poland_Pol16_20538_o9_2016-2017 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Poland_Pol16_20540_o10_2016-2017 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Poland_Pol16_29413_o23_2016-2017 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Poland_Pol17_03029_C201_2016-2017 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Poland_Pol17_04461_C210_2016-2017 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXZ96163.1 |
|
| Poland_Pol17_05838_C220_2016-2017 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Poland_ASFV_POL_Podlaskie_2015 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Uganda_R8_2015 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXB49334.1 |
|
| Uganda_R7_2015 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXB49508.1 |
|
| Uganda_R25_2015 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXB49680.1 |
|
| Uganda_N10_2015 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXB49851.1 |
|
| Uganda_R35_2015 |
Protein Protein Protein |
QED21706.1 QED21709.1 AXB50024.1 |
|
| Estonia_2014 |
Protein Protein Protein |
QED21706.1 QED21709.1 SPS73529.1 |
|
| Italy_26544_OG10_2010 |
Protein Protein Protein |
QED21706.1 QED21709.1 AJZ77045.1 |
|
| Italy_47_Ss_2008_2008 |
Protein Protein Protein |
QED21706.1 QED21709.1 AOO54464.1 |
|
| Portugal_OURT_88.3_1988 |
Protein Protein Protein |
QED21706.1 QED21709.1 CAN10455.1 |
|
| Spain_E75_1975 |
Protein Protein |
QED21706.1 CBH29206.1 |
|
| Russia_Georgia_2007 |
Protein Protein Protein |
QED21706.1 QED21709.1 CBW46772.1 |
|
| Kenya_Tk1_2005 |
Protein Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 AJL34119.1 |
|
| Kenya_Bus_2006 |
Protein Protein Protein |
QED21706.1 QED21709.1 AJL34284.1 |
|
| Russia_Odintsovo_2014 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Portugal_L60_1960 |
Protein Protein Protein |
QED21706.1 QED21709.1 AIY22297.1 |
|
| Portugal_NHV_1968 |
Protein Protein Protein |
QED21706.1 QED21709.1 AIY22455.1 |
|
| Russia_Kashino_2013 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Benin_1997 |
Protein Protein Protein |
QED21706.1 QED21709.1 CAN10205.1 |
|
| South_Africa_KNP_Pretorisuskop_1996 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| South_Africa_MGR_Mkuzi_1979 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Malawi_Lil_1983 |
Protein |
QED21706.1 |
|
| Kenya_1950 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Namibia_Warthog_1980 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| South_Africa_Warmbaths_1987 |
Genetic Remain Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Malawi_Tengani_1962 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| China_HLJ_2018 |
Protein Protein |
QED21709.1 QBH90594.1 |
|
| China_LN_2018 |
Protein Protein |
QED21709.1 QBH90779.1 |
|
| China_wbBS01_2018 |
Protein Protein Protein |
QED21706.1 QED21709.1 QDL88137.1 |
|
| Ukraine_Kyiv_2014 |
Protein Protein |
QED21707.1 QED21708.1 |
|
| Belgium_Etalle_wb_2018 |
Protein Protein Protein |
QED21706.1 QED21709.1 QED90549.1 |
|
| Lithuania_LT14_2014 |
Protein Protein Protein |
QED21706.1 QED21709.1 QEY87912.1 |
|
| South_Africa_1985 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| South_Africa_2_2008 |
Protein Protein Protein |
AJL34119.1 QED21706.1 QED21709.1 |
|
| Zambia_LIV_1983 |
Protein Protein |
QED21706.1 QED21709.1 |
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