ASFVdb The African Swine Fever Virus Database
Strain
Kenya_1950 (Region: Kenya ;  Strain: Kenya 1950;  Date: 1950)
Gene
BA71V-I215L (k13L)
Description
With frameshift mutation but translatable,  similar to African swine fever virus E75 strain E75 of INSD accession FN557520
GenBank Accession
Full name
Ubiquitin-conjugating enzyme E2      
Alternative Name
E2 ubiquitin-conjugating enzyme
Ubiquitin carrier protein
Ubiquitin-protein ligase
pI215L
 

Sequence

CDS
ATGGTTTCCAGATTTTTACTGACAGAGTACAGAAACCTAACAGAGAATCCTTCTGAACATTTCAAAGTCTCAGTGAATGAGAATAATCTAACTGAATGGGATGTCATCTTAAAGGGTCCATCTGACACTTTTTATGAGGGAGGCTTATTCAAGGCAAAGATCACCTTTCCTCCAAATTATCCATATGAACCACCCAAATTAACATTCACCTCTGAAATGTGGCATCCTAATATCTATCCTGATGGGAGACTATGCATCTCTATCTTACACACAGACAATGTTGAGGAAAGGGGAATGACTTGGTCTCCAGCTCAAAAGATTGAAACTGTTCTTCTTAGTGTAATCTCACTGTTCAATGAGCCAAATACGGATTCTCCAGCAAATGTAGATGCGGCCAAAAGCTACCGTAAATTGATGCATAAAGAGGATTTGGAATCATACCCCATGGAAGTTAAAAAGACTGTCAAAAAATCATTAGATGAGTGTTCAGCAGAAGATATAGAATATTTTAAAAATGCTGTATTCAATGTTCCAGCCATTCCCAGTGATGCTTATGAAGATGAACATGAAGATGAAGAAATGGAAGATGGCACATATATCTTAACCTATGATGATGAGGATGAAGAAGAGGAGGATGATGAGATGGATGATGAGTAA
Protein
MVSRFLLTEYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKSLDECSAEDIEYFKNAVFNVPAIPSDAYEDEHEDEEMEDGTYILTYDDEDEEEEDDEMDDE

Summary

Function
Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Performs the second step in the ubiquitination reaction that targets specifically a protein for degradation via the proteasome. By controlling the ubiquitination status of specific host proteins, the virus may target them to degradation and thereby optimize the viral replication.
Catalytic Activity
S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine + [E2 ubiquitin-conjugating enzyme]-L-cysteine = [E1 ubiquitin-activating enzyme]-L-cysteine + S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine.
Cofactor
Mg(2+)
Biophysicochemical Properties
Optimum pH is 7.5.
Similarity
Belongs to the ubiquitin-conjugating enzyme family.
Keywords
ATP-binding   Complete proteome   Early protein   Host cytoplasm   Host nucleus   Late protein   Nucleotide-binding   Transferase   Ubl conjugation pathway   Reference proteome  
Feature
chain  Ubiquitin-conjugating enzyme E2
EC Number
2.3.2.23
EMBL
KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    + More
AJL34317.1    AXB49369.1    AXB49543.1    AXB49715.1    AXB49886.1    AXB50059.1    KM111294    AJL34153.1    AY261360    AY261363    KM102979    KX354450    AJZ77128.1    AOO54513.1    AM712239    CAN10240.1    FN557520    CBH29241.1    KM262844    KP055815    AIY22332.1    AKO62822.1    M77121    U18466    AM712240    CAN10490.1    KM262845    AIY22490.1    FR682468    CBW46807.1    MG939583    MG939588    LS478113    AXZ95912.1    AXZ96195.1    SPS73564.1    AY261366    X62440    X71982    AY261361    KQ414638    KOC66862.1    GFJQ02000346    JAW06624.1    GFJQ02007594    JAV99375.1    GGLE01006244    MBY10370.1    GFWV01019942    MAA44670.1    KN880481    KIY69582.1    KK116364    KFM67549.1    GEGO01001212    JAR94192.1    EU247218    ABX75517.1    ABJB010215757    ABJB010558256    ABJB010573273    ABJB010800097    ABJB011088916    ABJB011107550    DS620720    EEC00696.1    GADI01004051    GANP01008144    GEFM01005447    JAA69757.1    JAB76324.1    JAP70349.1    JH971404    EKM76214.1    KN835169    KIK45642.1    GEDV01002541    JAP86016.1    GACK01008837    JAA56197.1    KV425574    KZT24952.1    KV426130    KZV87299.1    APGK01059412    APGK01059413    BT126567    KB741293    KB632046    AEE61531.1    ENN70240.1    ERL88251.1    KQ257454    KND01599.1    GBBM01002133    JAC33285.1    JO843060    AEO34677.1    GBBK01003306    JAC21176.1    GFAC01002668    JAT96520.1    GACK01005606    JAA59428.1    GFPF01013098    MAA24244.1    GEDV01002540    JAP86017.1    GEFH01002219    JAP66362.1    GAIX01007395    JAA85165.1    LJIG01009780    KRT82395.1    GALX01000454    JAB68012.1    KV448296    OAX38426.1    HG805835    CDW52934.1    GGMR01006190    MBY18809.1    LVVM01003391    OJA15015.1    JH431629    KK856214    PTY25219.1    LSMT01000169    PFX24701.1    HG001780    CDF36445.1    KV427631    KZT05227.1    NBIV01000115    PXF43686.1    GEMB01003945    JAR99311.1    GFXV01006765    MBW18570.1    GG666497    EEN62330.1    ABLF02032289    AK342968    BAH72783.1    GFTR01003977    JAW12449.1    KN825125    KIK94173.1    GGMS01016457    MBY85660.1    NQVE01000005    RAL54861.1    KB445801    EMD35024.1    GAKP01009002    GAKP01009001    JAC49950.1    CH902618    KPU78428.1    KPU78429.1    GBXI01007858    JAD06434.1    KPU78426.1    BT011473    AAR99131.1    CH379069    EAL30639.3    GAMC01006370    GAMC01006369    JAC00187.1    KPU78427.1    EDV40179.2    OUUW01000027    SPP89738.1    CM009297    PNT22894.1    CM002912    KMY99784.1    IAAA01026973    LAA07937.1    KB454497    EME30786.1    BT015283    AAT94512.1    UYSG01000693    VDL20895.1    KMY99783.1    AE014296    AAN11776.1    AGB94578.1    KMY99782.1    BT100166    AAF49611.2    ACY07071.1    AGBW02014274    OWR41997.1    JRES01000502    KNC30596.1    CH933809    EDW19156.2    CH954178    KQS44112.1    KQS44111.1    AAKN02057514    CM000159    KRK02102.1    KRK02109.1    KRG06521.1    KB469301    EPQ55751.1    CH964101    EDW79398.1    KRK02103.1    KRK02106.1   
Pfam
PF00179   UQ_con
Interpro
IPR016135   UBQ-conjugating_enzyme/RWD
IPR023313   UBQ-conjugating_AS
IPR000608   UBQ-conjugat_E2
SUPFAM
SSF54495   SSF54495
Gene 3D
PDB
2CYX     E-value=6.01097e-35,     Score=366

Ontologies

KEGG

Subcellular Location

From MSLVP
Cytoplasm
From Uniprot
Host cytoplasm   Accumulates in cytoplasmic viral factories. Faintly detected in the nucleus.   With evidence from 1 publications.
Host nucleus   Accumulates in cytoplasmic viral factories. Faintly detected in the nucleus.   With evidence from 1 publications.

Topology

Length:
218
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03097
outside
1  -  218
 
 

Population Genetic Test Statistics

Pi
0.0570759
Theta
0.0648525
Tajima's D
-0.4923804
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62822.1
China_AnhuiXCGQ_2018 Protein
AYW34112.1
China_ASFV-SY18_2018 Protein
AKO62822.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95912.1
Poland_Pol16_20538_o9_2016-2017    
Poland_Pol16_20540_o10_2016-2017    
Poland_Pol16_29413_o23_2016-2017    
Poland_Pol17_03029_C201_2016-2017    
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96195.1
Poland_Pol17_05838_C220_2016-2017    
Poland_ASFV_POL_Podlaskie_2015    
Uganda_R8_2015 Protein
AXB49369.1
Uganda_R7_2015 Protein
AXB49543.1
Uganda_R25_2015 Protein
AXB49715.1
Uganda_N10_2015 Protein
AXB49886.1
Uganda_R35_2015 Protein
AXB50059.1
Estonia_2014 Protein
SPS73564.1
Italy_26544_OG10_2010 Protein
AJZ77128.1
Italy_47_Ss_2008_2008 Protein
AOO54513.1
Portugal_OURT_88.3_1988 Protein
CAN10490.1
Spain_E75_1975 Protein
CBH29241.1
Russia_Georgia_2007 Protein
CBW46807.1
Kenya_Tk1_2005 Protein
AJL34153.1
Kenya_Bus_2006 Protein
Protein
AJL34317.1
AJL34317.1
Russia_Odintsovo_2014    
Portugal_L60_1960 Protein
AIY22332.1
Portugal_NHV_1968 Protein
AIY22490.1
Russia_Kashino_2013    
Benin_1997 Protein
CAN10240.1
South_Africa_KNP_Pretorisuskop_1996 Protein
AJL34317.1
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983    
Kenya_1950 Protein
AJL34317.1
Namibia_Warthog_1980    
South_Africa_Warmbaths_1987    
Malawi_Tengani_1962    
China_HLJ_2018 Protein
QBH90629.1
China_LN_2018 Protein
QBH90814.1
China_wbBS01_2018 Protein
QDL88172.1
Ukraine_Kyiv_2014 Protein
QED21757.1
Belgium_Etalle_wb_2018 Protein
QED90584.1
Lithuania_LT14_2014 Protein
QEY87947.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号

In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Change my password
Enter new password
Reenter new password
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.