ASFVdb The African Swine Fever Virus Database
Strain
Malawi_Tengani_1962 (Region: Malawi, Tengani, Nsanje District;  Strain: Tengani 62;  Date: 1962)
Gene
BA71V-CP2475L (p220)
Description
Pseudogene,  similar to African swine fever virus E75 strain E75 of INSD accession FN557520
GenBank Accession
 

Sequence

CDS
ATGGGTAACCGTGGATCTTCAATCTCTAGTAGACCACCGCTTTCATCAGAAGCAAATATATATGCGAAGTTACAGGATCATATACAAAGACAAACTCGTCCTTTTTCAGGGGGAGGTTATTTTAATGGCGGGGGGGACAAAAATCCTGTACAACACATCAAAGATTATCACATAGACTCCGTATCGAGTAAAGCAAAGCTGCGGATTATAGAGGGAATTATTAGGGCGATTGCCAAAATAGGGTTCAAAGTAGACACAAAGCAGCCCATCGAAGATATTCTTAAAGATATCAAAAAACAACTGCCCGATCCTCGAGCCGGTTCCACCTTTGTAAAAAATGCGGAAAAACAGGAGACCGTCTGTAAAATGATTGCAGACGCCATTAACCAGGAATTTATTGATTTAGGTCAGGATAAGCTCATAGATACCACCGAAGGGGCCGCCAGTATATGTCGACAAATAGTTCTGTACATCAACTCCCTAACGCATGGGCTGCGCGCGGAGTATCTTGATGTACACGGCAGTATAGAAAATACACTTGAAAACATCAAGCTGTTAAACGACGCCATTAAGCAACTTCATGAGCGCATGGTGACGGAGGTAACCAAAGCAGCCCCCAATGAGGAAGTCATTAATGCAGTCACCATGATTGAAGCAGTATATCGTCGACTTTTAAATGAACAAAACCTGCAAATCAACATTTTAACGAATTTTATTGACAATATTTTAACGCCCACCCAAAAGGAACTTGATAAACTGCAGACGGATGAGGTGGATATTATTAAACTTCTAAATGATACAAATAGTGTCTTGGGAACCAAAAATTTTGGAAAAGTACTTTCGTACACACTTTGTAATCTAGGCATTGCCGCGTCTGTTGCCAATAAAATTAATAAGGCTCTCCAGAAAGTAGGACTCAAGGTTGAACAGTACCTTCAAAGCAAAAACTGGGCGGAGTTTGACAAGGAGCTTGACCTCAAAAGATTTAGTGGCCTTGTCTCCGCAGAAAACATTGCCGAGTTTGAAAAAGCTGTGAACCTGTTGCGACAGACCTTTAATGAACGCCATAAAATCCTTGAGAACAGTTGTGCCAAAAAGGGGGGCGATGAGGAGAAAACGCCACTTGATAGGAGGATTGAAGCGCAAAGGCTGGATAGAAAGCACATCCTCATGGAATTTTTGAACAAAAGCACACAGGCCTATAACGACTTTTTGGAAAATGTGAAAAAAATAGGCATCAAACTTGTTAAAGAAATTGCCTTGACGCCGAACATAACGAGGCTTCGAGATGCTCTCTCGCGCATTAATGATATGGGCACCATCGCGCTTGATCTAAGTCTTATCGGCTTTTACACCAACGCAGCCGCACGAGAAGAACGCGAAACCTTCTTAACACAGCTTACGCTTGTTAAAAATGTTTTAGAGGAGATATCTAAAACCGACCCTAATTTTAAAAATCTTTATGACTCCTGCTCTCGCTTGCTGCAGATTATTGATTTTTATACCGATATTGTGCAAAAAAAGTATGGAGGCGAGGAGGACTGCGAGTGCACAAGGGTAGGCGGTGCTGCCCTCACAGTTGAAGAGCTTGGGCTCAGTAAGGCCGCGCGGTCACAGGTTGACCTCAACCAGGCAATTAATACCTTTATGTATTACTACTATGTGGCCCAGATTTACTCCAATTTAACGCATAACAAACAGGAGTTTCAATCCTACGAGGAAAACTATGCCACCATTCTCGGAGATGCTATTGCGGGACGCCTCATGCAGTTGGATACGGAAAAAAATGCGCGCATTAATTCTCCGGCTGTAGATCTTGCCAGAGGACACGTGGGCCCAAACCCTGGAGGTGCCCAAGAAGAAGACTGGAAGGCAACCGTAAGCGCCATCGAGCTAGAGTATGACGTAAAACGCCGGTTCTATCGAGCTCTGGAAGGGCTAGACCTTTATCTTAAAAATATTACCAAAACGTTTGTAAACAACATAGATTCTATTCAAACAGTCCAGCAGATGTTGGATGGCGTGCGCATTATAGGACGATGGTTCACCGAGGCAACAGGGGACACGCTTGCACAAGTCTTTGAAAGTTTTCCCACCTCCACAGGCAACGACTCCAACGTCTTTACGGATAATGCTCCTGCGGGCCACTACTACGAAAAAGTTGCGGCTGAAATCCAACAAGGCCGAAGCGTTGGTACCCTCCGTCCCGTCAGAGCAAGCCAGGCTAAAAACATTCGCGACCTTATCGGGCGCTCTCTCTCCAACTTTCAGGCGCTTAAAAATATCATCAATGCTTTTGCCCGGATTGGGGACATGCTTGGGGGAGAGGAGCTGCGGCAAATGGTGCCCATGTCGCCCCTGCAGATCTATAAAACCTTGCTTGAATATCTTCAACATTCTGCGCTTTCCGTGGGACTCAAAAATCTAAACCAATCAGAAATTGGAGGACAAAGGATGGCGCTTGCACAGACTGCCGAGGAGGCGGCTCAGCGGGTCTACCTCTCCACTGTGAGAGTTAACGACGCCCTATCAACCCGCTGGGAAACCGAGGACGTCTTCTTCACCTTCATGCTGAAAAGTATGGCCGCCAAGATTTTTATTGTATTAGGGATTTACGATATGTTTGAACGACCCGAGCCTGTATATAAACTTATACCCACGCGTATGATACTGGGAGGTGCCGATGAGCTAGAGCCCGAGGTAATTCCCGAGGCAGCGGAGCTTTACTTCCGCCTTCCTCGCCTCGCCGAGTTTTATCAAAAACTGTTTTCCTTCAGAGATGAAAATGTACAGATCTCGATGCTTCCTGAGCTGGAAGGAATTTTCTCAGGACTTATTCGCATTATCTTTATGCGTCCTATTGAGCTTATTAATATTGGTGACTACTCAGAAACCGAAATACGTCAGCTTATCAAAGAAATAAACGTCATTTACCAACACTTTAACTTAGAGTATGGCGAACAAGAAGCGACTAAAAAAGCGCTTATCCATTTTGTAAATGAAATAAACCGCAGGTTCGGCGTTATCACACGCACCGAATGGGAAAAATTTCAACGTATTGTTCAGGAAGCGCGAACTATGAATGACTTCGGAATGATGAATCAAACCAACTACTCCATTCTTCCTGATGAGGATGGCTATACACAATCCTCACAATTACTTCCCTCCGATAGGTTTATTAGTCCTTCAACCCAGCCTACCCCCAAGTGGCGCCCGGCACTATACAATATAGACTCTGTGGATGTCCAAACAGGAATGCTGCAGCCCAACTCCCAGTGGGATTTGGTACAAAAATTTAGGAAACAGCTTAGTGAGATGTTTGAAGATCCCAGTCTGCAACAAGAATTGGGCAAAATTTCCTACCAAGAACTCATTCGCCAGGCTATCAATGAACTCAAAAAGGAGCATACCGATAAAATTCAAATCGTTTCAAAACTTATTCAAGGCTCTGAGTCACTGGCAGATACAGATGTTAACAAAATATTTCTGTTTCATGAAACCGTTATTACAGGTCTTAACTTATTAAGTGCTATTTACGTACTTCTTAATAACTTTCGTAATAACATTAAAGGTTTAGACCTAGATACGATTCAAAAAAGCATCATTGAATGGTTACGAGAAACGCAAGCCGCTAACGTGAACCGAGCCAATCTTATTGACTGGCTCGGAAGAAAACACGGGGCCATCTCTGAGATTAGAAATCCAGGATTGGTTATTAAGGCAAACGATGCGCGACTTTCTGAGGTATACCCTGATCCCACTACTGACGCGACTGCACTTCAAGATAGAAATTTAGTCACAGAAACTCTTTTTGTCTGGTCTACACGATATGTGGGTATTCCTGCTGGTGGGGGAGTTCGTGCGGAGCAAGAATTAGCCGCAAGATATTTGGTAGACAATCAGCGAATCATGCAGCTCCTGCTGACTAATATCTTCGAAATGACCTCCAGTTTTAACAAAATGGTTCAAGTTCGCTTTCCCGAAACTAGCACCGCTCAGGTACACTTAGATTTTACGGGTCTTATTTCCTTAATTGATTCTTTGATGGCCGACACGAAGTATTTTCTTGATCTTTTACGCCCGCATATTGATAAAAATATTATTCAATACTATGAAAATAGATCCAATCCTGGCTCATTTTACTGGTTGGAAGAACATTTGATTGATAAGCTTATTAAACCACCCACTGATGCCGGAGGAAGGCCGCTTCCTGGCGGTGAATTGGGCCTGGAGGGGGTTAACCAAATCATTAATAAAACCTACACCTTGCTTACAAAGCCTTATAATGTACTGCAACTTCGGGGTGGAGCGCGAAGAGGAGACGCAGCTAATATTCAAATAAATAACAATCCCCAACCCTCTGAGCGCTTTGAACAATACGGTAGAGTATTCAGTAGACTCATATTTTACGATGCTTTGGAGAATAACTCTGGACTTCGTGTAGAGCAGGTGGCACTAGGAGACTTTAGACTCTCCAATCTTATTCGTACCAACAATGCTCAGGAGGAAAATACTCTTAGCTATTGGGACAACATGGCGCCCAGAACCTATGCCAACATCAATGATGCCGCAAACAACCTTCGACGTTATCGTCTATATGGATCAGATTATGGCATTCGAAATAATCGTAGCATGATGATGGTGTTCAACCAGCTTGTAGCCTCATACATTGCCCGGTTTTATGATGCTCCCAGCGGAAAAATATATCTGAATCTTATCAATGCATTTGCTAATGGGAACTTTAGCCAAGCAGTGATGGAGATGGGATATGCTCACCCTGACTTAGCACGCAATAATATCGCCTTTGGTCATAGGGGCGACCCCACAGAACAGTCGGTGCTTCTTCTGTCCTTGGGTCTCATGCTTCAGCGCCTTATTAAGGATACCAACCGCCAAGGCCTGAGTCAGCATCTTATTTCTACTTTAACAGAAATTCCTATTTACCTTAAAGAAAATTATAGAGCCAATCTTCCACTATTTAACAAAATGTTTAATATTCTTATCAGCCAGGGGGAGCTTTTAAAACAATTCATACAATACACAAATGTCCAACTGGCTCGTCCTAATCTGATGGGGCTCTTGGGGGCCAATAATGATTCCGTTATTTACTATAACAATAATATTAATGTTCCTACGACAGGGTTATCCGTCGGTCAGGCGGCCCTGCGGGGAATTGGCGGCGTATTTCGTCCCAATGTTACGCTTATGCCCCTAGGAGACGCACAAAATAATACGAGCGATGTTGTGCGAAAGCGATTGGTCGCAGTGATCGACGGGATCATTAGAGGCTCTCACACTCTGGCAGATTCTGCCATGGAGGTCCTGCACGAGCTTACCGATCATCCCATCTATCTTGAAACAGAAGAACACTTCATTCAAAACTATATGTCCCGGTACAATAAGGAGCCTCTTATGCCATTTTCACTTTCGCTCTATTATTTACGTGACCTAAGAATAGAAAATAATGAGGTATATGATCCTCTTCTTTACCCGAACCTTGAAAGCGGCTCCCCCGAGTTTAAACTACTATACGGCACAAGAAAATTACTGGGAAATGATCCGGTACAGCTCTCAGATATGCCCGGAGTACAGCTTATCATGAAAAATTATAATGAAACGGTAGTTGCTCGCGAACAAATTACTCCCACGCGATTTGAACACTTTTATACCCACGCTATTCAGGCTCTCCGATTTATCATAAATATCCGTAGTTTTAAAACAGTGATGATGTACAATGAAAATACTTTTGGTGGAGTTAATCTTATTAGCGAGAACAGAGACGATAAACCTATTATAACAGCGGGAATTGGGATGAATGCAGTGTATTCGCTTCGTAAAACATTGCAAGACGTGATTTCCTTCGTGGAAAGCTCTTACCAAGAGGAGCAAATCAATCATATTCACAAAATAGTGTCGCCAAAAGGCCAAACACGCACTCTTGGCTCTAATAGAGAGCGCGAGCGCATATTTAACTTGTTTGATATGAATATTATACCTATCAATGTAAATGCGCTGATGCGATCTATACCACTTGCCAATATTTACAACTATGACTATAGTTTTGAAGAAATTGCTTGTCTTATGTACGGCATTTCGGCCGAAAAGGTACGATCGCTAAACACCGCGGCTCCTCAGCCAGACATTGCAGAGGTATTAAACATTCCGAATCGTCCCCCCATGAACACTCGAGAATTTATGCTAAAACTTCTTATAAACCCCTATGTTTCAGTCTCTATCACCCAATATGGAAACGAATTGATGAGCAAGGGCAGTGCTGGATATATGTCACGCATTTTTAGAGGAGATAATGCGCTGAACATGGGCCGTCCTAAGTTTCTTTCCGACCAAATTTTTAATAAAGTGTTATTTGGAAGTCTGTATCCCACACAGTTTGACTATGATGAAGCAGGCCCGGGTTTGGCCGCAGGTATTCAACGTGGACGTGAACAGTGGGGGCAACCCTTATCAGAATACATCAATCAGGCTTTACATGAACTTGTCCGTACCATAAGAATACCTCAGAAACTTCGAGTTCTAAGAAATATTATTGTTAAAAACCAACTTATAGCGGATTTAACTACAATTAGAGAGCAGCTTGTAAGTATGCGAAGAGAAGTTGAAAACATGTTACAAACTCCTGAAATTCAAAACAATCCAACCCCTGAGGTCATTGCAGCCGCTCAAAACTGGGCACAGCAATACCGAGCTCGGGTAGATATCTTAATTAATTTTATAGGAAATATTGGGCAACCCAATTCAATGTTAGAATTAATACAAAATATTACGCCCGTAACAGTGCGAGCACAATTAGGCGTCATTTTTAATAGACATGGAATCCCTGTTCCACAACCCCGTCAGATACTACAAACTGATGATGAAGCGACTCAATGGTTTATGACCAATATTATAAACATACCTGCCATTATAATAACACCCTTTACGGACCTCGCAGATGATCTTAGAACATTTTTAGAAACTTTGGAACGATATGTTTTTAATGTTCCAAGATGGTTGGGTCCTAGCACAGGACGAGTTGCACGAGCACCCGTTCGTATGGCACCTGGAGATATGCGACATCCCACTTCATATACGGAAAATAGTGTGCTGACCTATATCACGGAACAAAATCGGGAAGAAGGACCCTGGTCCATTGTTAAACAGGTGGGAGTTGGAAGACAAAAGCCTACCTTAGTACAAATCGGAAAGGATCGCTTTGACACTCGCCTTATACGCAATCTAATATTTATTACAAATATACAGCGACTATTACGACTGCGTCTAAACCTAGAACTCTCGCAGTTCAGAAATGTGCTCGTCAGTCCTGACCACATTATAAACCCCAGCATTACAGAGTATGGGTTCTCCATCACAGGACCCAGTGAGACCTTCTCAGATAAACAGTATGATAGCGATATTCGGATTTTATAA
Protein
Not available

Summary

Uniprot
ProteinModelPortal
PDB
6OGE     E-value=0.502924,     Score=85

Ontologies

Population Genetic Test Statistics

Pi
0.0494748
Theta
0.0568881
Tajima's D
-0.7379015
CLR
0.226315
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62773.1
China_AnhuiXCGQ_2018 Protein
AYW34063.1
China_ASFV-SY18_2018 Protein
AKO62773.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95866.1
Poland_Pol16_20538_o9_2016-2017 Protein
AJL34270.1
Poland_Pol16_20540_o10_2016-2017 Genetic Remain
AJL34270.1
Poland_Pol16_29413_o23_2016-2017 Genetic Remain
AJL34270.1
Poland_Pol17_03029_C201_2016-2017 Protein
AXZ96054.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96149.1
Poland_Pol17_05838_C220_2016-2017 Genetic Remain
AJL34270.1
Poland_ASFV_POL_Podlaskie_2015 Genetic Remain
AJL34270.1
Uganda_R8_2015 Protein
AXB49320.1
Uganda_R7_2015 Protein
AXB49494.1
Uganda_R25_2015 Protein
AXB49666.1
Uganda_N10_2015 Protein
AXB49837.1
Uganda_R35_2015 Protein
AXB50010.1
Estonia_2014 Protein
SPS73515.1
Italy_26544_OG10_2010 Protein
AJZ77038.1
Italy_47_Ss_2008_2008 Protein
AOO54441.1
Portugal_OURT_88.3_1988 Protein
CAN10441.1
Spain_E75_1975 Protein
CBH29192.1
Russia_Georgia_2007 Protein
CBW46758.1
Kenya_Tk1_2005 Protein
AJL34105.1
Kenya_Bus_2006 Protein
Protein
AJL34270.1
AJL34270.1
Russia_Odintsovo_2014 Genetic Remain
AJL34270.1
Portugal_L60_1960 Protein
AIY22283.1
Portugal_NHV_1968 Protein
AIY22441.1
Russia_Kashino_2013 Genetic Remain
AJL34270.1
Benin_1997 Protein
CAN10191.1
South_Africa_KNP_Pretorisuskop_1996 Genetic Remain
AJL34270.1
South_Africa_MGR_Mkuzi_1979 Genetic Remain
AJL34270.1
Malawi_Lil_1983 Protein
AJL34270.1
Kenya_1950 Protein
AJL34270.1
Namibia_Warthog_1980 Genetic Remain
AJL34270.1
South_Africa_Warmbaths_1987 Genetic Remain
AJL34270.1
Malawi_Tengani_1962 Genetic Remain
AJL34270.1
China_HLJ_2018 Protein
QBH90580.1
China_LN_2018 Protein
QBH90765.1
China_wbBS01_2018 Protein
QDL88123.1
Ukraine_Kyiv_2014 Protein
Protein
Protein
QED21684.1
QED21685.1
QED21686.1
Belgium_Etalle_wb_2018 Protein
QED90535.1
Lithuania_LT14_2014 Protein
QEY87898.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

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