Strain

South_Africa_2_2008 (Region: South Africa; Strain: RSA_2_2008; Date: 2008)

Gene

pE301R

Description

Annotated in NCBI, E301R

Location

MN336500.1(+):163111-164016

GenBank Accession

QGM12867.1

Full name

Uncharacterized protein E301R

CDS

ATGTCTGCAGATATTCGTCGTGGTCCTGGCAGACCGCCAAAGAAAAGGGTTGTTCCCAACTTTGTGCGCAAGGGCATTCTGGAAAAACCAGTTCGGCCACAAAGCCGTCTCGAGTTTTCCTATGTTATCCCGCTGTTATTTACAAATCTTTTTATTTACTTTACAAATCTTACAAGTACAAATATTTTGGTGCGATGTACCCCCACCGAGATTACCTTTTTTTCACGTGTCCAGTCGCAAGCAAGCTTTGTTATTGCCACCATCGACGGAAAAAACGTGTACCATTATTACGCCAGTGTTGTCTTTTGGCTACGCATCAATACAGAGCTCGTTGCAAAAATGTTTATCAGCATTGTCCGCTCTTTTTTACAAATTACCATCGTTCACCGCTATGTCAAGCCTGCAACCCTGTTTTTTATCTTTACGGATTTTGTCATCGACAAGGAGTGCACGTATCACATTACGGTCTCGGAGCCCGAGCTCGATATGGACCTTATTGCAATGGAAAAAAGCATCAGTGCAGAAAGACTCAAAAACTATCCTCTGCGGTGGGAGTTTACCTCCAAACAGCTCAAGAAAACATTTACCGACTTATCAAACTACACCGAGCTCGTGTCCATTGCAAAACTCGGCGGCGATACGCCGCTGCACCTGTATTTCCAAAAGTTTATCTCCATCTCATACCACGAGATGTATATATCTTCCAACAAGATCAACCTGTCCTCGACCATCCCTATGTCGCAGGTGTTCCAGATATATGTTATATTTGCTCACATCAAGTCACTGGCCTCGGCTATGGTCACCGACAAGATCCGCATTCTGTGCGAAGAAAATGGGAACCTATTCTTTCAATCAGAAATGGATGCCCTTATGTTATATACGATTACCTTGTACAACATGTTATAG

Protein

MSADIRRGPGRPPKKRVVPNFVRKGILEKPVRPQSRLEFSYVIPLLFTNLFIYFTNLTSTNILVRCTPTEITFFSRVQSQASFVIATIDGKNVYHYYASVVFWLRINTELVAKMFISIVRSFLQITIVHRYVKPATLFFIFTDFVIDKECTYHITVSEPELDMDLIAMEKSISAERLKNYPLRWEFTSKQLKKTFTDLSNYTELVSIAKLGGDTPLHLYFQKFISISYHEMYISSNKINLSSTIPMSQVFQIYVIFAHIKSLASAMVTDKIRILCEENGNLFFQSEMDALMLYTITLYNML

Miscellaneous

Shares some weak sequence similarity with PCNA (Proliferating cell nuclear antigen).

Similarity

Belongs to the asfivirus E301R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein E301R

Uniprot

P0CAC9 Q65239 A9JLB6 D4I5F1 A9JM53 A0A0A1E3R5 + More
P0CAD0 Q65196 E0WM77 A0A2X0TCD9 A0A0C5B0A1 P0CAC8 A0A5B8XAX8

Pubmed

8021596 18198370 25406173 26618713 11831707 21470447 + More
25645905

EMBL

AY261363 X71982 AY261361 AM712239 CAN10227.1 FN557520 + More
CBH29227.1 AM712240 CAN10476.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22318.1 AIY22476.1 AJZ77104.1 AKO62808.1 AOO54496.1 AY261366 U18466 FR682468 CBW46793.1 MG939583 MG939588 LS478113 AXZ95899.1 AXZ96182.1 SPS73550.1 KM111294 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34140.1 AJL34305.1 AXB49356.1 AXB49530.1 AXB49702.1 AXB49873.1 AXB50046.1 AY261360 MN194591 QED21740.1

Proteomes

UP000000859 UP000000860 UP000130745 UP000101090 UP000108903 UP000110401 + More
UP000117635 UP000142390 UP000241813 UP000266411 UP000000858 UP000000624 UP000141072 UP000101566 UP000105860 UP000000861 UP000321214

PRIDE

P0CAC9 Q65239 P0CAD0 Q65196 P0CAC8

ProteinModelPortal

P0CAC9 Q65239 A9JLB6 D4I5F1 A9JM53 A0A0A1E3R5 + More
P0CAD0 Q65196 E0WM77 A0A2X0TCD9 A0A0C5B0A1 P0CAC8 A0A5B8XAX8

PDB

5ZQ8 E-value=8.28182, Score=66

Ontologies

KEGG

vg:22220356

Subcellular Location

From MSLVP

Others-Single

Topology

Length:

301

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

24.23406

Exp number, first 60 AAs:

13.70333

Total prob of N-in:

0.50107

POSSIBLE N-term signal

sequence

outside

1 - 301

Population Genetic Test Statistics

Pi

0.0192221

Theta

0.0295818

Tajima's D

-0.8836826

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62808.1
China_AnhuiXCGQ_2018	Protein	AYW34098.1
China_ASFV-SY18_2018	Protein	AKO62808.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95899.1
Poland_Pol16_20538_o9_2016-2017	Protein	QED21740.1
Poland_Pol16_20540_o10_2016-2017	Protein	QED21740.1
Poland_Pol16_29413_o23_2016-2017	Protein	QED21740.1
Poland_Pol17_03029_C201_2016-2017	Protein	QED21740.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96182.1
Poland_Pol17_05838_C220_2016-2017	Protein	QED21740.1
Poland_ASFV_POL_Podlaskie_2015	Protein	QED21740.1
Uganda_R8_2015	Protein	AXB49356.1
Uganda_R7_2015	Protein	AXB49530.1
Uganda_R25_2015	Protein	AXB49702.1
Uganda_N10_2015	Protein	AXB49873.1
Uganda_R35_2015	Protein	AXB50046.1
Estonia_2014	Protein	SPS73550.1
Italy_26544_OG10_2010	Protein	AJZ77104.1
Italy_47_Ss_2008_2008	Protein	AOO54496.1
Portugal_OURT_88.3_1988	Protein	CAN10476.1
Spain_E75_1975	Protein	CBH29227.1
Russia_Georgia_2007	Protein	CBW46793.1
Kenya_Tk1_2005	Protein	AJL34140.1
Kenya_Bus_2006	Protein	AJL34305.1
Russia_Odintsovo_2014	Protein	QED21740.1
Portugal_L60_1960	Protein	AIY22318.1
Portugal_NHV_1968	Protein	AIY22476.1
Russia_Kashino_2013	Protein	QED21740.1
Benin_1997	Protein	CAN10227.1
South_Africa_KNP_Pretorisuskop_1996	Protein	QED21740.1
South_Africa_MGR_Mkuzi_1979	Protein	QED21740.1
Malawi_Lil_1983	Protein	QED21740.1
Kenya_1950	Protein	QED21740.1
Namibia_Warthog_1980	Protein	QED21740.1
South_Africa_Warmbaths_1987	Protein	QED21740.1
Malawi_Tengani_1962	Protein	QED21740.1
China_HLJ_2018	Protein	QBH90615.1
China_LN_2018	Protein	QBH90800.1
China_wbBS01_2018	Protein	QDL88158.1
Ukraine_Kyiv_2014	Protein Protein	QED21740.1 QED21740.1
Belgium_Etalle_wb_2018	Protein	QED90570.1
Lithuania_LT14_2014	Protein	QEY87933.1
South_Africa_1985	Protein	QGM12941.1
South_Africa_2_2008	Protein	QGM12867.1
Zambia_LIV_1983

Sequence