Strain

South_Africa_2_2008 (Region: South Africa;  Strain: RSA_2_2008;  Date: 2008)

Gene

NifS-like protein

Description

With frameshift mutation but translatable,  similar to pyridoxal phosphate-dependent aminotransferases of class V

Location

MN336500.1(+):159378-160529

GenBank Accession

CAN10223.1

Full name

NifS-like protein      

CDS

ATGGCCTCCATTCTCACGCTGGACGGGCTATATGCAGAGGTTCCAAAATTCTTACCAGAGGCGTTACGAGAGGGATGTGCTGGCAAGAATCCTCTATGCTTTTATATTCAACAAATTTTATATTTATTGGGATGTGTTGGTATCGAGTATCATGTTCTTTTTACCAGCAGCTCCGAGGAAGCAAATACTCATATGTTCATGGCCGCCGTGCGTCGCCATTTGCTGCGGACGCAGCAAAGGCCTCATGTCATTATCGGAGCAGCCGAGCCCCCTACCGTCACCGAATGTGTGCAGGCATTGGCGCAGGAAAAACGCTGCGTATACACCATCATCCCCCTACAAAATTTTGCAATACATCCTGTTGCGGTATACGATGCCATACAAAGCAATACCTGCTTACCGTGCATTTCGGGCACCAATGCTGTTGTCAAAACGTTCAACAAACTCCAGGACATTACCAAAGTGTTACGAGGTATTCCCCTGCACTCGGAAGTGTGTGTTCTTGTTTACCAAGGATGTATTATACAAAATCCGCCCGCTGTTACTTTTTCAATATATACTCTCTACGGCTTCTTGGGAGTCGGTGTCTTGGGAATGCAGAAAAAGGTCATGCAAGGATTGGGGCCGCTCATTTTTGGAGGAGGGCTGCGAGGCGGAAGCCCTATTATACCCGGAATTCATGCCATGTATACAACGCTATCCCAGCAAAGGCCTTCCATGCAAAAAATATATACAATACATACGCTGTTTATGCAAACTTTACAAAAACATCAGCATGTATATCTACCCATACGGGGCGTGTCTACAAAAGACATGTCATGTCTACAAAAGACATACCCTCTACCGACATGCCTGTTGGCCCGAAGGAACTCCCGGGCTATATTTTATTTACCGTTGGTCGTCGCGCCGAGGAGCTACAAAAAAAAATTTTCACTATATTTATTATACAGGTTGGCCGTATTATTGTCTCACAAGAGATACTGTTTCGTATCAAAATACCCCAGAAATACTGGGAGACATTATTGTTCATCCAATTACGAGATATTTTGTCCAAAGAGGATATACAGAGAGTTATGGTTGTTTTGTTGCATTTACATACCATCACTCCTCGTGGCTCTCTTCCTCCTCCGAGCTACTCTTCTTCTTTTTCTT

Protein

MASILTLDGLYAEVPKFLPEALREGCAGKNPLCFYIQQILYLLGCVGIEYHVLFTSSSEEANTHMFMAAVRRHLLRTQQRPHVIIGAAEPPTVTECVQALAQEKRCVYTIIPLQNFAIHPVAVYDAIQSNTCLPCISGTNAVVKTFNKLQDITKVLRGIPLHSEVCVLVYQGCIIQNPPAVTFSIYTLYGFLGVGVLGMQKKVMQGLGPLIFGGGLRGGSPIIPGIHAMYTTLSQQRPSMQKIYTIHTLFMQTLQKHQHVYLPIRGVSTKDMSCLQKTYPLPTCLLARRNSRAIFYLPLVVAPRSYKKKFSLYLLYRLAVLLSHKRYCFVSKYPRNTGRHYCSSNYEIFCPKRIYRELWLFCCIYIPSLLVALFLLRATLLLFL

Cofactor

pyridoxal 5'-phosphate

Similarity

Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.

Keywords

Complete proteome   Pyridoxal phosphate   Reference proteome  

Feature

chain  NifS-like protein

Uniprot

P0C9C9   A9JLA9   D4I5E7   A9JM45   A0A0A1DY95   Q65192   + More
A0A2X0RUF5   E0WM73   P0C9D0   A0A0C5B2Q9   A0A0C5B2A0   A0A2Z5DEN0   P0C9D1   Q65236  

Pubmed

18198370    25406173    26618713    11831707    21470447    25645905    + More
8021596   

EMBL

AY261363    AM712239    CAN10223.1    FN557520    CBH29223.1    AM712240    + More
CAN10472.1    KM262844    KM262845    KM102979    KP055815    KX354450    AIY22314.1    AIY22472.1    AJZ77079.1    AKO62804.1    AOO54490.1    U18466    MG939583    MG939588    LS478113    AXZ95896.1    AXZ96179.1    SPS73546.1    FR682468    CBW46789.1    AY261366    KM111295    AJL34301.1    KM111294    AJL34136.1    MH025916    MH025917    MH025918    MH025919    MH025920    AXB49352.1    AXB49526.1    AXB49698.1    AXB49869.1    AXB50042.1    AY261360    X71982    AY261361   

Proteomes

UP000000859    UP000130745    UP000101090    UP000108903    UP000110401    UP000117635    + More
UP000142390    UP000241813    UP000266411    UP000000624    UP000141072    UP000000858    UP000101566    UP000105860    UP000000861    UP000000860   

PRIDE

Q65192    P0C9D0    P0C9D1   

Pfam

PF00266   Aminotran_5

Interpro

IPR015421   PyrdxlP-dep_Trfase_major
IPR015422   PyrdxlP-dep_Trfase_dom1
IPR015424   PyrdxlP-dep_Trfase
IPR000192   Aminotrans_V_dom

SUPFAM

SSF53383   SSF53383

Gene 3D

3.40.640.10     3.90.1150.10    

ProteinModelPortal

P0C9C9   A9JLA9   D4I5E7   A9JM45   A0A0A1DY95   Q65192   + More
A0A2X0RUF5   E0WM73   P0C9D0   A0A0C5B2Q9   A0A0C5B2A0   A0A2Z5DEN0   P0C9D1   Q65236  

PDB

4R5F     E-value=0.126582,     Score=84