ASFVdb The African Swine Fever Virus Database
Strain
Zambia_LIV_1983 (Region: Zambia;  Strain: LIV_5_40;  Date: 1983)
Gene
p300_2R
Description
Annotated in NCBI,  p300_2R
GenBank Accession
Full name
Protein MGF 300-2R      
 

Sequence

CDS
ATGATTACTTTATACGAAGCCGCTATTACAACGCTTATCACACACCGAAAACAGATTTTACAACACCCCGATACCCGTGTTATTTTACTACCTTTGGGATTATACTGGGATACAACGCATATTCTTGTTATATGTCGTGTATGTGGGAAAATGTGTCTTACTGGAAAACACAGTACAAAATGTATTATCATTATTTGTCTACTTATTCTTGCCATATATACAAAGAATATGCGTATGGTTGTTACCTTGTTATGTATGGGTGCGGATGTATCATATATACATCTTTTATACAATATGTTACAACTGTCATACAACCAGCTGTCTATGCTTACAAGCAACTCGCAGATTTCGATGTACGAGCTTCATGCTATATGCTACCTTTTATATGGTCGGCTTCCCAAAAAAATTACACAAGGGATGCAACTGTGTACAACAATGGCGGGACTATGTGGTGTACTTTTATGA
Protein
MITLYEAAITTLITHRKQILQHPDTRVILLPLGLYWDTTHILVICRVCGKMCLTGKHSTKCIIIICLLILAIYTKNMRMVVTLLCMGADVSYIHLLYNMLQLSYNQLSMLTSNSQISMYELHAICYLLYGRLPKKITQGMQLCTTMAGLCGVLL

Summary

Function
Plays a role in virus cell tropism, and may be required for efficient virus replication in macrophages.
Similarity
Belongs to the asfivirus MGF 300 family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Protein MGF 300-2R

Ontologies

KEGG

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
154
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
42.13362
Exp number, first 60 AAs:
11.79132
Total prob of N-in:
0.55580
POSSIBLE N-term signal
sequence
outside
1  -  154
 
 

Population Genetic Test Statistics

Pi
0.0486859
Theta
0.0600356
Tajima's D
-0.6441886
CLR
0.203342
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62697.1
China_AnhuiXCGQ_2018 Protein
CAN10113.1
China_ASFV-SY18_2018    
Poland_Pol16_20186_o7_2016-2017 Protein
CAN10113.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10113.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10113.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10113.1
Poland_Pol17_03029_C201_2016-2017 Protein
CAN10113.1
Poland_Pol17_04461_C210_2016-2017 Protein
CAN10113.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10113.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10113.1
Uganda_R8_2015 Protein
AXB49245.1
Uganda_R7_2015 Protein
AXB49419.1
Uganda_R25_2015 Protein
AXB49591.1
Uganda_N10_2015 Protein
AXB49764.1
Uganda_R35_2015 Protein
AXB49935.1
Estonia_2014 Protein
SPS73436.1
Italy_26544_OG10_2010 Protein
AJZ77150.1
Italy_47_Ss_2008_2008 Protein
AOO54329.1
Portugal_OURT_88.3_1988 Protein
CAN10370.1
Spain_E75_1975 Protein
CBH29115.1
Russia_Georgia_2007    
Kenya_Tk1_2005 Protein
AJL34031.1
Kenya_Bus_2006 Protein
AJL34195.1
Russia_Odintsovo_2014    
Portugal_L60_1960 Protein
AIY22206.1
Portugal_NHV_1968 Protein
AIY22372.1
Russia_Kashino_2013 Protein
CAN10113.1
Benin_1997 Protein
Protein
CAN10113.1
CAN10113.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10113.1
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983    
Kenya_1950 Protein
CAN10113.1
Namibia_Warthog_1980 Protein
CAN10113.1
South_Africa_Warmbaths_1987 Protein
CAN10113.1
Malawi_Tengani_1962 Protein
CAN10113.1
China_HLJ_2018 Protein
CAN10113.1
China_LN_2018 Protein
CAN10113.1
China_wbBS01_2018 Protein
CAN10113.1
Ukraine_Kyiv_2014 Protein
Protein
QED21567.1
QED21568.1
Belgium_Etalle_wb_2018 Protein
QED90456.1
Lithuania_LT14_2014 Protein
QEY87819.1
South_Africa_1985 Protein
QGM12887.1
South_Africa_2_2008 Protein
QGM12805.1
Zambia_LIV_1983 Protein
QGM12682.1
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