Strain

Ukraine_Kyiv_2014 (Region: Ukraine;  Strain: ASFV/Kyiv/2016/131;  Date: 2014)

Gene

D1133L

Description

Annotated in NCBI,  ASFV_Kyiv_2016_131_00170

Location

MN194591.1(-):141949-142392

GenBank Accession

QED21706.1

Full name

Putative ATP-dependent RNA helicase D1133L       + More

CDS

ATGCTTAATATTAATGTTAAACGAAAAGAAAACGACATCGTCATAGGCTATATGGAAAGCAAGGGAAAGGCCCTTAAATTTAAAATCCGCCCACCTATCCAGGTTTTAAAAAAGAATGAGATTACTGATATTCGCATGCTAAACCGGGGAGCCGTATGCGAAACACGCGGACGGGAGGAGCAACAAAAAATTGCTGACCAATTGGGCATAAGTTTAAACCTTACAAAGATTAGTGCCATCAAGCTCTGCTTACTCATTCGCAATAACCTTTTGCAAAAAGAAATGGAGGCTCGTAATCAACCAAATGGAATGCAGGATGGAATCCGCTGGTTTTACCTTTTAACGACAAAATGCCGTCACTTGTGCACACATCTTAGGGCACGTTGTGATACACAAAGTATATCTCAAAGTAAATACAAAGTGTATACACCATTGCTTATTTAA

Protein

MLNINVKRKENDIVIGYMESKGKALKFKIRPPIQVLKKNEITDIRMLNRGAVCETRGREEQQKIADQLGISLNLTKISAIKLCLLIRNNLLQKEMEARNQPNGMQDGIRWFYLLTTKCRHLCTHLRARCDTQSISQSKYKVYTPLLI

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate
ATP + H2O = ADP + H(+) + phosphate

Similarity

Belongs to the DEAD box helicase family. DEAH subfamily.

Keywords

ATP-binding   Complete proteome   Helicase   Hydrolase   Nucleotide-binding   Reference proteome  

Feature

chain  Putative ATP-dependent RNA helicase D1133L

Uniprot

A0A5B8XDC4   D4I5U3   E0WM56   A0A2X0RVI6   A0A3Q9CZS8   A0A515HFE2   + More
A9JL77   A9JM12   A0A0A1DYH2   Q89525   A0A0C5AWE0   P0C9A7   A0A5K1HXG0   A0A0C5AWU3   P0C9A5   P0C9A6   Q89425   A0A1X6WGI1  

Pubmed

21470447    30547827    18198370    25406173    26618713    8262374    + More
11831707    25645905    8021596    8376971   

EMBL

MN194591    QED21706.1    FN557520    CBH29206.1    FR682468    CBW46772.1    + More
MG939583    MG939588    LS478113    AXZ95880.1    AXZ96163.1    SPS73529.1    MH910495    AZP53967.1    MK645909    QDL88137.1    AM712239    CAN10205.1    AM712240    CAN10455.1    KM262844    KM262845    KM102979    KP055815    KX354450    AIY22297.1    AIY22455.1    AJZ77045.1    AKO62787.1    AOO54464.1    L10061    U18466    KM111294    AJL34119.1    AY261360    LR722600    VVW94218.1    KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    AJL34284.1    AXB49334.1    AXB49508.1    AXB49680.1    AXB49851.1    AXB50024.1    AY261363    AY261366    X71982    X72951    AY261361    LT706986    SIP86034.1   

Proteomes

UP000321214    UP000101090    UP000141072    UP000316600    UP000130745    UP000108903    + More
UP000110401    UP000117635    UP000142390    UP000241813    UP000266411    UP000000624    UP000105860    UP000000861    UP000101566    UP000000859    UP000000858    UP000000860    UP000201921   

PRIDE

Q89525    P0C9A7    P0C9A5    P0C9A6    Q89425   

Pfam

PF00271   Helicase_C

Interpro

IPR001650   Helicase_C
IPR027417   P-loop_NTPase
IPR014001   Helicase_ATP-bd

SUPFAM

SSF52540   SSF52540

CDD

cd00079  HELICc
cd00079  HELICc

ProteinModelPortal

A0A5B8XDC4   D4I5U3   E0WM56   A0A2X0RVI6   A0A3Q9CZS8   A0A515HFE2   + More
A9JL77   A9JM12   A0A0A1DYH2   Q89525   A0A0C5AWE0   P0C9A7   A0A5K1HXG0   A0A0C5AWU3   P0C9A5   P0C9A6   Q89425   A0A1X6WGI1  

KEGG

vg:22220335    

GO

GO:0004386  F:helicase activity
GO:0005524  F:ATP binding

From MSLVP

Single-Pass Membrane

Length:

147

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04036

Exp number, first 60 AAs:

0

Total prob of N-in:

0.40283

Length:

147

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04036

Exp number, first 60 AAs:

0

Total prob of N-in:

0.40283

outside

1  -  147

outside

1  -  147

 

 

Pi

0.0290015

Theta

0.0363095

Tajima's D

-0.797788

CLR

0.174114

Interpretation

No evidence of Selection