ASFVdb The African Swine Fever Virus Database
Strain
Ukraine_Kyiv_2014 (Region: Ukraine;  Strain: ASFV/Kyiv/2016/131;  Date: 2014)
Gene
M1249L
Description
Annotated in NCBI,  ASFV_Kyiv_2016_131_00090
GenBank Accession
Full name
Uncharacterized protein M1249L      
 

Sequence

CDS
ATGTCGATCCGTTCTATTCAAATAAAGAAAGATATGACCACGCCCTCCACCGAAACACAACCCAAGCCTCCACAGGAGCCATGGACTTTCGATTACGGAAAAATAATCAAGACGGCCAAGATTTTGGATATCAGTCCTGCTGTGATAGAGGCCATAGGGGCCATGGAGGGGCGCTCCTACGCAGACATCAGGGAAGGCCAGGGTGCCCCGCCACCACCTACCTCAATGGATGATCCAAGGCTCATGGCGGTCGACTCTGCCGTACGTATTTTCTTATATAATTATAACTGTTTGCGGCACGTTAGTACATTTAACAAGCCTCCTATACATGTTGAAAGGCTTGTAAAGCACCTGTCGTACGAGGAAAAGGAGGATTTGGAAAAGGTGCTGCCTAACGTTGTGAATGAATATCACACTACATTTAAACACCTACGGGTAACAGATCCTGCCAGCGCCTTGCTTTACTCTATAGAATTTTTATGTATAAGTTTCTTAACGCTGTATGAAATTAAAGAGCCCTCCTGGGTTGTGAATATTGTGAGAGAGTTTGCGCTGACAGAACTCAACACTATTATTCAAAGCGAAAAGCTGTTAAGTAAGCCCGGTGCATTTAACTTTATGATTTTTGGAGAGGACTTTGTGTGCTCTGGGGAAGATAGCTCCATGGACGACATCTCGGCCTACAGTTCTCCCGGACTTTTTGGGGAAGACATTATTGACCGGCTCGATGACCCTTTTAGCATCGAGGATGTTGACATTTCTTTAGATGTGTTGGACAACTTAGCGCCCCAGTAG
Protein
MSIRSIQIKKDMTTPSTETQPKPPQEPWTFDYGKIIKTAKILDISPAVIEAIGAMEGRSYADIREGQGAPPPPTSMDDPRLMAVDSAVRIFLYNYNCLRHVSTFNKPPIHVERLVKHLSYEEKEDLEKVLPNVVNEYHTTFKHLRVTDPASALLYSIEFLCISFLTLYEIKEPSWVVNIVREFALTELNTIIQSEKLLSKPGAFNFMIFGEDFVCSGEDSSMDDISAYSSPGLFGEDIIDRLDDPFSIEDVDISLDVLDNLAPQ

Summary

Similarity
Belongs to the asfivirus M1249L family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Uncharacterized protein M1249L
PDB
3A5K     E-value=0.407315,     Score=83

Ontologies

KEGG

Subcellular Location

From MSLVP
Capsid

Topology

Length:
264
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.761669999999999
Exp number, first 60 AAs:
0.00232
Total prob of N-in:
0.16382
outside
1  -  264
 
 

Population Genetic Test Statistics

Pi
0.0299613
Theta
0.0386839
Tajima's D
-0.6305228
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62742.1
China_AnhuiXCGQ_2018 Protein
AYW34032.1
China_ASFV-SY18_2018 Protein
Protein
AIY22252.1
AKO62742.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95835.1
Poland_Pol16_20538_o9_2016-2017 Protein
AJL34074.1
Poland_Pol16_20540_o10_2016-2017 Protein
AJL34074.1
Poland_Pol16_29413_o23_2016-2017 Protein
AJL34074.1
Poland_Pol17_03029_C201_2016-2017 Protein
AXZ96023.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96118.1
Poland_Pol17_05838_C220_2016-2017 Protein
AJL34074.1
Poland_ASFV_POL_Podlaskie_2015 Protein
AJL34074.1
Uganda_R8_2015 Protein
AXB49289.1
Uganda_R7_2015 Protein
AXB49463.1
Uganda_R25_2015 Protein
AXB49635.1
Uganda_N10_2015 Protein
AXB49806.1
Uganda_R35_2015 Protein
AXB49979.1
Estonia_2014 Protein
SPS73483.1
Italy_26544_OG10_2010 Protein
AJZ77041.1
Italy_47_Ss_2008_2008 Protein
AOO54393.1
Portugal_OURT_88.3_1988 Protein
CAN10408.1
Spain_E75_1975 Protein
CBH29161.1
Russia_Georgia_2007 Protein
CBW46726.1
Kenya_Tk1_2005 Protein
Protein
AJL34074.1
AJL34074.1
Kenya_Bus_2006 Protein
AJL34239.1
Russia_Odintsovo_2014 Protein
AJL34074.1
Portugal_L60_1960 Protein
Protein
AIY22251.1
AIY22252.1
Portugal_NHV_1968 Protein
AIY22410.1
Russia_Kashino_2013 Protein
AJL34074.1
Benin_1997 Protein
CAN10160.1
South_Africa_KNP_Pretorisuskop_1996 Protein
AJL34074.1
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983 Protein
AJL34074.1
Kenya_1950 Protein
AJL34074.1
Namibia_Warthog_1980 Protein
AJL34074.1
South_Africa_Warmbaths_1987 Protein
AJL34074.1
Malawi_Tengani_1962 Protein
AJL34074.1
China_HLJ_2018 Protein
QBH90548.1
China_LN_2018 Protein
QBH90733.1
China_wbBS01_2018 Protein
QDL88091.1
Ukraine_Kyiv_2014 Protein
Protein
QED21626.1
QED21627.1
Belgium_Etalle_wb_2018 Protein
QED90503.1
Lithuania_LT14_2014 Protein
QEY87866.1
South_Africa_1985 Protein
AJL34074.1
South_Africa_2_2008 Protein
AJL34074.1
Zambia_LIV_1983    
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