Strain

Belgium_Etalle_wb_2018 (Region: Belgium; Strain: Belgium/Etalle/wb/2018; Date: 2018)

Gene

H240R

Description

Annotated in NCBI, NA

Location

MK543947.1(+):155419-156144

GenBank Accession

QED90562.1

Full name

Uncharacterized protein H240R

Sequence

CDS

ATGGCTGCAAACATTATTGCAACAAGAGCCGTGCCAAAGATGGCCAGCAAAAAAGAGCATCAATACTGTCTGCTAGACTCCCAGGAAAAGCGTCATGGGCATTATCCCTTTTCATTTGAATTAAAGCCTTATGGGCAAACAGGCGCAAATATCATAGGAGTACAGGGCTCACTTACCCATGTTATCAAAATGACAGTATTTCCATTTATGATTCCTTTTCCTTTACAAAAAACTCATATAGATGATTTTATTGGTGGACGCATTTATTTATTTTTTAAGGAACTGGACATGCAAGCAGTTTCTGATGTAAATGGAATGCAATACCACTTCGAGTTCAAGGTTGTTCCTGTAAGCCCCAACCAAGTAGAGCTTCTTCCTGTGAATAATAAATATAAATTTACATATGCTATACCGGTAGTGCAATACCTTACCCCAATCTTTTATGATCTTTCGGGACCGCTAGATTTCCCATTAGATACTCTTTCGGTCCATGTGGATATCCTCTCCAATCATATACAGCTTCCTATCCAAAACCATAACCTAACAACGGGTGATCGTGTTTTTATTTCTGGATATAAACACCTGCAAACGATTGAATTATGTAAAAATAACAAGATTTTTATCAAAAATATACCGCCGCTTTCATCCGAAAAAATAAAACTATATATACTAAAAAATCGAATCAGAATTCCGCTATACTTTAAATCTTTAAAAACGTCTAAGTAA

Protein

MAANIIATRAVPKMASKKEHQYCLLDSQEKRHGHYPFSFELKPYGQTGANIIGVQGSLTHVIKMTVFPFMIPFPLQKTHIDDFIGGRIYLFFKELDMQAVSDVNGMQYHFEFKVVPVSPNQVELLPVNNKYKFTYAIPVVQYLTPIFYDLSGPLDFPLDTLSVHVDILSNHIQLPIQNHNLTTGDRVFISGYKHLQTIELCKNNKIFIKNIPPLSSEKIKLYILKNRIRIPLYFKSLKTSK

Summary

Similarity

Belongs to the asfivirus H240R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein H240R

Uniprot

A0A3Q9CZ89 E0WM69 A0A2X0RU16 A0A5J6RC95 A9JLA2 D4I5E3 + More
A9JM37 A0A0A1E173 Q65190 P0CAA8 A0A0C5AZH7 A0A0C5AZ05 Q65235 P0CAA9 P0CAA7

Pubmed

30547827 21470447 25808027 18198370 25406173 26618713 + More
11831707 25645905 8021596

EMBL

MH910495 AZP54041.1 FR682468 CBW46785.1 MG939583 MG939588 + More
LS478113 AXZ95892.1 AXZ96175.1 SPS73542.1 MK628478 QEY87925.1 AM712239 CAN10219.1 FN557520 CBH29219.1 AM712240 CAN10468.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22310.1 AIY22468.1 AJZ77122.1 AKO62800.1 AOO54485.1 U18466 AY261363 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34297.1 AXB49348.1 AXB49522.1 AXB49694.1 AXB49865.1 AXB50038.1 KM111294 AJL34132.1 X71982 AY261361 AY261366 AY261360

Proteomes

UP000141072 UP000130745 UP000101090 UP000108903 UP000110401 UP000117635 + More
UP000142390 UP000241813 UP000266411 UP000000624 UP000000859 UP000101566 UP000105860 UP000000860 UP000000858 UP000000861

ProteinModelPortal

A0A3Q9CZ89 E0WM69 A0A2X0RU16 A0A5J6RC95 A9JLA2 D4I5E3 + More
A9JM37 A0A0A1E173 Q65190 P0CAA8 A0A0C5AZH7 A0A0C5AZ05 Q65235 P0CAA9 P0CAA7

Ontologies

KEGG

vg:22220349

Subcellular Location

From MSLVP

Host nucleus. Host cytoplasm.

Topology

Length:

241

Number of predicted TMHs:

Exp number of AAs in TMHs:

1.23601

Exp number, first 60 AAs:

0.5259

Total prob of N-in:

0.23083

outside

1 - 241

Population Genetic Test Statistics

0.0485552

Theta

0.0557504

Tajima's D

-0.5605186

CLR

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62800.1
China_AnhuiXCGQ_2018	Protein	AYW34090.1
China_ASFV-SY18_2018	Protein	AKO62800.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95892.1
Poland_Pol16_20538_o9_2016-2017	Protein	CBW46785.1
Poland_Pol16_20540_o10_2016-2017	Protein	CBW46785.1
Poland_Pol16_29413_o23_2016-2017	Protein	CBW46785.1
Poland_Pol17_03029_C201_2016-2017	Protein	CBW46785.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96175.1
Poland_Pol17_05838_C220_2016-2017	Protein	CBW46785.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CBW46785.1
Uganda_R8_2015	Protein	AXB49348.1
Uganda_R7_2015	Protein	AXB49522.1
Uganda_R25_2015	Protein	AXB49694.1
Uganda_N10_2015	Protein	AXB49865.1
Uganda_R35_2015	Protein	AXB50038.1
Estonia_2014	Protein	SPS73542.1
Italy_26544_OG10_2010	Protein	AJZ77122.1
Italy_47_Ss_2008_2008	Protein	AOO54485.1
Portugal_OURT_88.3_1988	Protein	CAN10468.1
Spain_E75_1975	Protein	CBH29219.1
Russia_Georgia_2007	Protein Protein	CBW46785.1 CBW46785.1
Kenya_Tk1_2005	Protein	AJL34132.1
Kenya_Bus_2006	Protein	AJL34297.1
Russia_Odintsovo_2014	Protein	CBW46785.1
Portugal_L60_1960	Protein	AIY22310.1
Portugal_NHV_1968	Protein	AIY22468.1
Russia_Kashino_2013	Protein	CBW46785.1
Benin_1997	Protein	CAN10219.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CBW46785.1
South_Africa_MGR_Mkuzi_1979	Protein	CBW46785.1
Malawi_Lil_1983	Protein	CBW46785.1
Kenya_1950	Protein	CBW46785.1
Namibia_Warthog_1980	Protein	CBW46785.1
South_Africa_Warmbaths_1987	Protein	CBW46785.1
Malawi_Tengani_1962	Protein	CBW46785.1
China_HLJ_2018	Protein	QBH90607.1
China_LN_2018	Protein	QBH90792.1
China_wbBS01_2018	Protein	QDL88150.1
Ukraine_Kyiv_2014	Protein	QED21728.1
Belgium_Etalle_wb_2018	Protein	QED90562.1
Lithuania_LT14_2014	Protein	QEY87925.1
South_Africa_1985	Protein	CBW46785.1
South_Africa_2_2008	Protein	QGM12864.1
Zambia_LIV_1983	Protein	CBW46785.1