Strain

Poland_ASFV_POL_Podlaskie_2015 (Region: Poland; Strain: ASFV/POL/2015/Podlaskie; Date: 2015)

Gene

pCP312R

Description

Annoated by sequence mapping, VOCs Family: Unknown (BA71V-CP312R)

Location

MH681419.1(+):127304-128242

GenBank Accession

CAN10445.1

Full name

Uncharacterized protein CP312R

CDS

ATGTTACTAGTAAAAATGACTACACACATCTTTCACGCAGATGATCTCCTACAAGCATTGCAACAAGCAAAAGCAGAAAAAAATTTTTCATCTGTATTTTCTTTAGATTGGGATAAATTACGCACAGCGAAGCGTAATACAACGGTTAAATATGTTACGGTCAATGTCATAGTAAAAGGCAAAAAAGCTCCGCTAATGTTTAACTTTCAAAATGAAAAACATGTAGGAACCATTCCTCCCAGTACCGATGAAGAGGTTATACGGATGAATGCTGAAAATCCAAAGTTTTTGGTGAAAAAACGTGACAGGGATCCCTGTTTGCAGTTCAACAAATACAAAATCTCGCCGCCATTGGAAGATGATGGTCTCACTGTTAAAAAGAATGAGCAGGGTGAAGAAATATACCCCGGCGACGAAGAAAAATCTAAGTTGTTTCAAATTATTGAACTGTTAGAAGAAGCCTTTGAAGACGCTGTGCAAAAAGGTCCTGAAGCCATGAAAACGAAACATGTTATAAAATTAATTCAAAGAAAAATTTCTAATAGCGCGGTTAAAAACGCAGACAAACCTTTGCCGAATCCTATCGCACGCATTCGTATTAAAATCAATCCCGCTACAAGTATACTAACACCAATATTGCTTGATAAAAATAAGCCCATTACTTTACAGAATGGTAAAACAAGCTTTGAAGAGTTAAAAGATGAAGACGGCGTTAAGGCCAATCCGGATAATATTCATAAGCTTATAGAATCGCATTCTATACATGATGGCATCATTAATGCTAGATCTATTTGCATCAGCAATATGGGCATTTCATTTCCGCTTTGCTTGGAAATGGGAGTTGTAAAAGTTTTTGAAAAAAATAATGGGATTGATGTGAACTCCATTTATGGCTCAGACGATATTTCAACTCTTGTTAATCAGATTGCTATTGCTTAA

Protein

MLLVKMTTHIFHADDLLQALQQAKAEKNFSSVFSLDWDKLRTAKRNTTVKYVTVNVIVKGKKAPLMFNFQNEKHVGTIPPSTDEEVIRMNAENPKFLVKKRDRDPCLQFNKYKISPPLEDDGLTVKKNEQGEEIYPGDEEKSKLFQIIELLEEAFEDAVQKGPEAMKTKHVIKLIQRKISNSAVKNADKPLPNPIARIRIKINPATSILTPILLDKNKPITLQNGKTSFEELKDEDGVKANPDNIHKLIESHSIHDGIINARSICISNMGISFPLCLEMGVVKVFEKNNGIDVNSIYGSDDISTLVNQIAIAX

Similarity

Belongs to the asfivirus CP312R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein CP312R

Uniprot

D4I5T3 A0A0A1DXQ7 Q65180 A0A385KN01 A9JLZ3 A0A0A1DYG2 + More
P0CAD3 E0WM46 A0A2X0RVH4 A9JL61 A0A1C6ZY18 P0CAD4 P0CAD2 A0A0C5AWT3 A0A0C5AWD2 P0CAD1

Pubmed

25406173 26618713 11831707 18198370 21470447 25645905 + More

EMBL

FN557520 CBH29196.1 KM262844 KP055815 KX354450 AIY22287.1 + More
AKO62777.1 AOO54446.1 U18466 MG939583 MG939587 MG939588 AXZ95870.1 AXZ96058.1 AXZ96153.1 AM712240 CAN10445.1 KM262845 AIY22445.1 AY261363 FR682468 CBW46762.1 LS478113 SPS73519.1 AM712239 CAN10195.1 KM102979 AJZ77103.1 AY261366 AY261361 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34274.1 AXB49324.1 AXB49498.1 AXB49670.1 AXB49841.1 AXB50014.1 KM111294 AJL34109.1 AY261360

Proteomes

UP000101090 UP000142390 UP000241813 UP000266411 UP000000624 UP000108903 + More
UP000110401 UP000000859 UP000141072 UP000130745 UP000117635 UP000000858 UP000000860 UP000101566 UP000105860 UP000000861

PRIDE

Q65180 P0CAD2

ProteinModelPortal

D4I5T3 A0A0A1DXQ7 Q65180 A0A385KN01 A9JLZ3 A0A0A1DYG2 + More
P0CAD3 E0WM46 A0A2X0RVH4 A9JL61 A0A1C6ZY18 P0CAD4 P0CAD2 A0A0C5AWT3 A0A0C5AWD2 P0CAD1

PDB

5KCS E-value=0.180326, Score=80

Ontologies

KEGG

vg:22220325

Subcellular Location

From MSLVP

Cytoplasm

Topology

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0332900000000001

Exp number, first 60 AAs:

0.0009

Total prob of N-in:

0.02186

outside

1 - 313

Population Genetic Test Statistics

Pi

0.036894

Theta

0.0489238

Tajima's D

-0.8770323

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62777.1
China_AnhuiXCGQ_2018	Protein	AYW34067.1
China_ASFV-SY18_2018	Protein	AKO62777.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95870.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10445.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10445.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10445.1
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ96058.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96153.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10445.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10445.1
Uganda_R8_2015	Protein	AXB49324.1
Uganda_R7_2015	Protein	AXB49498.1
Uganda_R25_2015	Protein	AXB49670.1
Uganda_N10_2015	Protein	AXB49841.1
Uganda_R35_2015	Protein	AXB50014.1
Estonia_2014	Protein	SPS73519.1
Italy_26544_OG10_2010	Protein	AJZ77103.1
Italy_47_Ss_2008_2008	Protein	AOO54446.1
Portugal_OURT_88.3_1988	Protein Protein	CAN10445.1 CAN10445.1
Spain_E75_1975	Protein	CBH29196.1
Russia_Georgia_2007	Protein	CBW46762.1
Kenya_Tk1_2005	Protein	AJL34109.1
Kenya_Bus_2006	Protein	AJL34274.1
Russia_Odintsovo_2014	Protein	CAN10445.1
Portugal_L60_1960	Protein	AIY22287.1
Portugal_NHV_1968	Protein	AIY22445.1
Russia_Kashino_2013	Protein	CAN10445.1
Benin_1997	Protein	CAN10195.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10445.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10445.1
Malawi_Lil_1983	Protein	CAN10445.1
Kenya_1950	Protein	CAN10445.1
Namibia_Warthog_1980	Protein	CAN10445.1
South_Africa_Warmbaths_1987	Protein	CAN10445.1
Malawi_Tengani_1962	Protein	CAN10445.1
China_HLJ_2018	Protein	QBH90584.1
China_LN_2018	Protein	QBH90769.1
China_wbBS01_2018	Protein	QDL88127.1
Ukraine_Kyiv_2014	Protein	QED21690.1
Belgium_Etalle_wb_2018	Protein	QED90539.1
Lithuania_LT14_2014	Protein	QEY87902.1
South_Africa_1985	Protein	QGM12926.1
South_Africa_2_2008	Protein	QGM12852.1
Zambia_LIV_1983	Protein	QGM12739.1

Sequence