Strain

Uganda_R25_2015 (Region: Uganda, Tororo district; Strain: R25; Date: 2015)

Gene

pH171R

Description

Annotated in NCBI, product contains tandem repeats

Location

MH025918.1(+):151504-152031

GenBank Accession

AXB49689.1

Full name

Uncharacterized protein H171R

CDS

ATGGTAGTTTATGACCTGCTCGTTTCTTTAAGTAAGGAATCAATAGATGTGCTACGGTTTATAGAGACAAATCTTGCGGCGTTTAACCAGCAGTATATTTTTTTCAATATCCAAAGAAAAAACTCAATCATGACGCCCCTTCTCATCACGCCGCAGCAGGAAAAAATTTCGCAAATTGTGGAGTTTTTAATGGATGAATATAATAAAAGCAATAGAAGACCTGGGCCGCCGCGTGAGCAGCCCATGCCGGCGTACCCGTTATTGCCGTATCAACAGTCCTCGGAAGAACAGCCCATGATGCCATATCAACAGCCCCCGGGTGATGACGATCAGCCATATGATCAAATATACCATAAAAAACACGCCTCGCAACAAGTAAATACTGAACTGAGCGATTATTATCAACATATTCTTGCTTTAGGCGATGAAGACAAAGGTATGGACAGCATGTTAAAACTCCCAGAAAGGGCAAAAAGGGAAAGCGACGATGAGGACGACATGTTTCCTATAAAAAAACTAACGACGTAA

Protein

MVVYDLLVSLSKESIDVLRFIETNLAAFNQQYIFFNIQRKNSIMTPLLITPQQEKISQIVEFLMDEYNKSNRRPGPPREQPMPAYPLLPYQQSSEEQPMMPYQQPPGDDDQPYDQIYHKKHASQQVNTELSDYYQHILALGDEDKGMDSMLKLPERAKRESDDEDDMFPIKKLTT

Similarity

Belongs to the asfivirus H171R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein H171R

Uniprot

A0A0C5AZ01 P0CA73 A0A0C5AZH2 A0A2Z5DEU5 E0WM64 A0A2X0RVU9 + More
A9JL93 D4I5V1 A9JM28 A0A0A1DY27 Q65185 P0CA75 Q65230 P0CA74

Pubmed

25645905 21470447 18198370 25406173 26618713 11831707 + More
8021596

EMBL

KM111294 AJL34127.1 AY261360 KM111295 AJL34292.1 MH025916 + More
MH025917 MH025918 MH025919 MH025920 AXB49343.1 AXB49517.1 AXB49689.1 AXB49860.1 AXB50033.1 FR682468 CBW46780.1 MG939583 MG939588 LS478113 AXZ95887.1 AXZ96170.1 SPS73537.1 AM712239 CAN10214.1 FN557520 CBH29214.1 AM712240 CAN10463.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22305.1 AIY22463.1 AJZ77145.1 AKO62795.1 AOO54480.1 U18466 AY261366 X71982 AY261361 AY261363

Proteomes

UP000105860 UP000000861 UP000101566 UP000141072 UP000130745 UP000101090 + More
UP000108903 UP000110401 UP000117635 UP000142390 UP000241813 UP000266411 UP000000624 UP000000858 UP000000860 UP000000859

PRIDE

P0CA73

ProteinModelPortal

A0A0C5AZ01 P0CA73 A0A0C5AZH2 A0A2Z5DEU5 E0WM64 A0A2X0RVU9 + More
A9JL93 D4I5V1 A9JM28 A0A0A1DY27 Q65185 P0CA75 Q65230 P0CA74

PDB

6H8K E-value=4.99803, Score=64

Ontologies

KEGG

vg:22220344

Subcellular Location

From MSLVP

Nucleus

Topology

Length:

175

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16071

Exp number, first 60 AAs:

0.16071

Total prob of N-in:

0.03137

outside

1 - 175

Population Genetic Test Statistics

Pi

0.0295469

Theta

0.0382168

Tajima's D

-0.7760344

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein Protein	QED21721.1 AKO62795.1
China_AnhuiXCGQ_2018	Protein Protein	QED21721.1 AYW34085.1
China_ASFV-SY18_2018
Poland_Pol16_20186_o7_2016-2017	Protein Protein	QED21721.1 AXZ95887.1
Poland_Pol16_20538_o9_2016-2017	Protein Protein	AJL34127.1 QED21721.1
Poland_Pol16_20540_o10_2016-2017	Protein Protein	AJL34127.1 QED21721.1
Poland_Pol16_29413_o23_2016-2017	Protein Protein	AJL34127.1 QED21721.1
Poland_Pol17_03029_C201_2016-2017	Protein Protein	AJL34127.1 QED21721.1
Poland_Pol17_04461_C210_2016-2017	Protein Protein	QED21721.1 AXZ96170.1
Poland_Pol17_05838_C220_2016-2017	Protein Protein	AJL34127.1 QED21721.1
Poland_ASFV_POL_Podlaskie_2015	Protein Protein	AJL34127.1 QED21721.1
Uganda_R8_2015	Protein Protein	QED21721.1 AXB49343.1
Uganda_R7_2015	Protein Protein	QED21721.1 AXB49517.1
Uganda_R25_2015	Protein Protein	QED21721.1 AXB49689.1
Uganda_N10_2015	Protein Protein	QED21721.1 AXB49860.1
Uganda_R35_2015	Protein Protein	QED21721.1 AXB50033.1
Estonia_2014	Protein Protein	QED21721.1 SPS73537.1
Italy_26544_OG10_2010	Protein Protein	QED21721.1 AJZ77145.1
Italy_47_Ss_2008_2008	Protein Protein	QED21721.1 AOO54480.1
Portugal_OURT_88.3_1988	Protein Protein	QED21721.1 CAN10463.1
Spain_E75_1975	Protein Protein	QED21721.1 CBH29214.1
Russia_Georgia_2007	Protein Protein	QED21721.1 CBW46780.1
Kenya_Tk1_2005	Protein Protein Protein	AJL34127.1 QED21721.1 AJL34127.1
Kenya_Bus_2006	Protein Protein	QED21721.1 AJL34292.1
Russia_Odintsovo_2014	Protein Protein	AJL34127.1 QED21721.1
Portugal_L60_1960	Protein Protein	QED21721.1 AIY22305.1
Portugal_NHV_1968	Protein Protein	QED21721.1 AIY22463.1
Russia_Kashino_2013	Protein Protein	AJL34127.1 QED21721.1
Benin_1997	Protein Protein	QED21721.1 CAN10214.1
South_Africa_KNP_Pretorisuskop_1996	Protein Protein	AJL34127.1 QED21721.1
South_Africa_MGR_Mkuzi_1979	Protein Protein	AJL34127.1 QED21721.1
Malawi_Lil_1983	Protein Protein	AJL34127.1 QED21721.1
Kenya_1950	Protein Protein	AJL34127.1 QED21721.1
Namibia_Warthog_1980	Protein Protein	AJL34127.1 QED21721.1
South_Africa_Warmbaths_1987	Protein Protein	AJL34127.1 QED21721.1
Malawi_Tengani_1962	Protein Protein	AJL34127.1 QED21721.1
China_HLJ_2018	Protein Protein	QED21721.1 QBH90602.1
China_LN_2018	Protein Protein	QED21721.1 QBH90787.1
China_wbBS01_2018	Protein Protein	QED21721.1 QDL88145.1
Ukraine_Kyiv_2014	Protein	QED21722.1
Belgium_Etalle_wb_2018	Protein Protein	QED21721.1 QED90557.1
Lithuania_LT14_2014	Protein Protein	QED21721.1 QEY87920.1
South_Africa_1985	Protein Protein	QED21721.1 QGM12933.1
South_Africa_2_2008	Protein Protein	QED21721.1 QGM12859.1
Zambia_LIV_1983	Protein Protein	QED21721.1 QGM12752.1

Sequence