Strain

Uganda_R7_2015 (Region: Uganda, Tororo district; Strain: R7; Date: 2015)

Gene

pI73R

Description

Annotated in NCBI, gene expression: early

Location

MH025917.1(+):171287-171508

GenBank Accession

AXB49541.1

Full name

Uncharacterized protein I73R

Sequence

CDS

ATGGAGACTCAGAAATTGGTTTCCATGGTTAAGGAAGCCTTAGATAAGTATTCTTATCCTCTTACTGCTAAAAACATTAAAGCAGTAATACAAAAAGAGTACAAAGTTGTCTTACCCACAGGTTCTATAAATAGTATACTGTACAGTAACACAGAACTTTTTGAGAAGGTCGATAAGACAAATACTATTTATCCCCCACTTTGGATACGGAAAACTAACTAA

Protein

METQKLVSMVKEALDKYSYPLTAKNIKAVIQKEYKVVLPTGSINSILYSNTELFEKVDKTNTIYPPLWIRKTN

Summary

Similarity

Belongs to the asfivirus I73R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein I73R

Uniprot

A0A0C5B0B6 A0A0C5B2B1 P0CAJ9 A9JLD6 D4I5G3 A9JM72 + More
A0A0A1E197 P27946 E0WM89 A0A2X0RU36 P0CAK2 P0CAK1 P0CAK0 Q65251

Pubmed

25645905 18198370 25406173 26618713 1309282 11831707 + More
21470447 8409937

EMBL

KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 + More
AJL34315.1 AXB49367.1 AXB49541.1 AXB49713.1 AXB49884.1 AXB50057.1 KM111294 AJL34151.1 AY261360 AM712239 CAN10238.1 FN557520 CBH29239.1 AM712240 CAN10488.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22330.1 AIY22488.1 AJZ77186.1 AKO62820.1 AOO54510.1 U18466 M77121 FR682468 CBW46805.1 MG939583 MG939588 LS478113 AXZ95911.1 AXZ96194.1 SPS73562.1 AY261366 AY261363 AY261361 X71982 CAA50847.1

Proteomes

UP000101566 UP000105860 UP000000861 UP000130745 UP000101090 UP000108903 + More
UP000110401 UP000117635 UP000142390 UP000241813 UP000266411 UP000000624 UP000141072 UP000000858 UP000000859 UP000000860

ProteinModelPortal

A0A0C5B0B6 A0A0C5B2B1 P0CAJ9 A9JLD6 D4I5G3 A9JM72 + More
A0A0A1E197 P27946 E0WM89 A0A2X0RU36 P0CAK2 P0CAK1 P0CAK0 Q65251

Ontologies

KEGG

vg:22220368

GO:0004386 F:helicase activity

Subcellular Location

From MSLVP

Multi-Pass Membrane

Topology

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

0.01497

Exp number, first 60 AAs:

0.01497

Total prob of N-in:

0.41877

outside

1 - 73

Population Genetic Test Statistics

0.0580727

Theta

0.0665309

Tajima's D

-0.4507282

CLR

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62820.1
China_AnhuiXCGQ_2018
China_ASFV-SY18_2018
Poland_Pol16_20186_o7_2016-2017
Poland_Pol16_20538_o9_2016-2017
Poland_Pol16_20540_o10_2016-2017
Poland_Pol16_29413_o23_2016-2017
Poland_Pol17_03029_C201_2016-2017
Poland_Pol17_04461_C210_2016-2017
Poland_Pol17_05838_C220_2016-2017
Poland_ASFV_POL_Podlaskie_2015
Uganda_R8_2015	Protein	AXB49367.1
Uganda_R7_2015	Protein	AXB49541.1
Uganda_R25_2015	Protein	AXB49713.1
Uganda_N10_2015	Protein	AXB49884.1
Uganda_R35_2015	Protein	AXB50057.1
Estonia_2014
Italy_26544_OG10_2010	Protein	AJZ77186.1
Italy_47_Ss_2008_2008	Protein	AOO54510.1
Portugal_OURT_88.3_1988	Protein	CAN10488.1
Spain_E75_1975	Protein	CBH29239.1
Russia_Georgia_2007
Kenya_Tk1_2005	Protein	AJL34151.1
Kenya_Bus_2006	Protein	AJL34315.1
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22330.1
Portugal_NHV_1968	Protein	AIY22488.1
Russia_Kashino_2013
Benin_1997	Protein	CAN10238.1
South_Africa_KNP_Pretorisuskop_1996
South_Africa_MGR_Mkuzi_1979
Malawi_Lil_1983
Kenya_1950
Namibia_Warthog_1980
South_Africa_Warmbaths_1987
Malawi_Tengani_1962
China_HLJ_2018
China_LN_2018
China_wbBS01_2018
Ukraine_Kyiv_2014
Belgium_Etalle_wb_2018
Lithuania_LT14_2014
South_Africa_1985	Protein Protein	QGM12948.1 QGM12948.1
South_Africa_2_2008	Protein	QGM12874.1
Zambia_LIV_1983	Protein	QGM12948.1