Strain

Poland_Pol17_05838_C220_2016-2017 (Region: Poland; Strain: Pol17_05838_C220; Date: 2016-2017)

Gene

pI73R

Description

Annoated by sequence mapping, pI73R

Location

MG939589.1(+):172127-172342

GenBank Accession

QGM12948.1

Full name

Uncharacterized protein I73R

CDS

ATGGAGACTCAGAAGTTGATTTCCATGGTTAAGGAAGCCTTAGAAAAATATCAATACCCTCTTACTGCTAAAAATATTAAAGTAGTGATACAAAAAGAGCACAATGTCGTCTTACCTACAGGATCTATAAATAGCATACTGTACAGTAACTCAGAACTTTTTGAGAAGATTGATAAGACAAATACCATTTATCCCCCGCTTTGGATACGGAAAAAC

Protein

METQKLISMVKEALEKYQYPLTAKNIKVVIQKEHNVVLPTGSINSILYSNSELFEKIDKTNTIYPPLWIRKN

Similarity

Belongs to the asfivirus I73R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein I73R

Uniprot

E0WM89 A0A2X0RU36 P0CAK2 A9JLD6 D4I5G3 A9JM72 + More
A0A0A1E197 P27946 P0CAK1 P0CAK0 Q65251 A0A0C5B0B6 A0A0C5B2B1 P0CAJ9

Pubmed

21470447 18198370 25406173 26618713 1309282 11831707 + More
8409937 25645905

EMBL

FR682468 CBW46805.1 MG939583 MG939588 LS478113 AXZ95911.1 + More
AXZ96194.1 SPS73562.1 AY261366 AM712239 CAN10238.1 FN557520 CBH29239.1 AM712240 CAN10488.1 KM262844 KM262845 KM102979 KP055815 KX354450 AIY22330.1 AIY22488.1 AJZ77186.1 AKO62820.1 AOO54510.1 U18466 M77121 AY261363 AY261361 X71982 CAA50847.1 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34315.1 AXB49367.1 AXB49541.1 AXB49713.1 AXB49884.1 AXB50057.1 KM111294 AJL34151.1 AY261360

Proteomes

UP000141072 UP000000858 UP000130745 UP000101090 UP000108903 UP000110401 + More
UP000117635 UP000142390 UP000241813 UP000266411 UP000000624 UP000000859 UP000000860 UP000101566 UP000105860 UP000000861

ProteinModelPortal

E0WM89 A0A2X0RU36 P0CAK2 A9JLD6 D4I5G3 A9JM72 + More
A0A0A1E197 P27946 P0CAK1 P0CAK0 Q65251 A0A0C5B0B6 A0A0C5B2B1 P0CAJ9

PDB

6DGE E-value=4.72529, Score=62

Ontologies

KEGG

vg:22220368

GO

GO:0004386 F:helicase activity

Subcellular Location

From MSLVP

Single-Pass Membrane

Topology

Length:

72

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00741

Exp number, first 60 AAs:

0.00741

Total prob of N-in:

0.40212

outside

1 - 72

Population Genetic Test Statistics

Pi

0.0580139

Theta

0.0672097

Tajima's D

-0.442957

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971
China_AnhuiXCGQ_2018	Protein	AYW34110.1
China_ASFV-SY18_2018	Protein	AKO62820.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95911.1
Poland_Pol16_20538_o9_2016-2017	Protein	QGM12948.1
Poland_Pol16_20540_o10_2016-2017	Protein	QGM12948.1
Poland_Pol16_29413_o23_2016-2017	Protein	QGM12948.1
Poland_Pol17_03029_C201_2016-2017	Protein	QGM12948.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96194.1
Poland_Pol17_05838_C220_2016-2017	Protein	QGM12948.1
Poland_ASFV_POL_Podlaskie_2015	Protein	QGM12948.1
Uganda_R8_2015
Uganda_R7_2015
Uganda_R25_2015
Uganda_N10_2015
Uganda_R35_2015
Estonia_2014	Protein	SPS73562.1
Italy_26544_OG10_2010
Italy_47_Ss_2008_2008
Portugal_OURT_88.3_1988
Spain_E75_1975
Russia_Georgia_2007	Protein	CBW46805.1
Kenya_Tk1_2005
Kenya_Bus_2006
Russia_Odintsovo_2014	Protein	QGM12948.1
Portugal_L60_1960
Portugal_NHV_1968
Russia_Kashino_2013	Protein	QGM12948.1
Benin_1997
South_Africa_KNP_Pretorisuskop_1996	Protein	QGM12948.1
South_Africa_MGR_Mkuzi_1979	Protein	QGM12948.1
Malawi_Lil_1983
Kenya_1950
Namibia_Warthog_1980	Protein	QGM12948.1
South_Africa_Warmbaths_1987	Protein	QGM12948.1
Malawi_Tengani_1962
China_HLJ_2018	Protein	QBH90627.1
China_LN_2018	Protein	QBH90812.1
China_wbBS01_2018	Protein	QDL88170.1
Ukraine_Kyiv_2014	Protein	QED21755.1
Belgium_Etalle_wb_2018	Protein	QED90582.1
Lithuania_LT14_2014	Protein	QEY87945.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983

Sequence