Strain

Poland_Pol17_05838_C220_2016-2017 (Region: Poland; Strain: Pol17_05838_C220; Date: 2016-2017)

Gene

H233R

Description

With frameshift mutation but translatable, H233R

Location

MG939589.1(+):154558-154971

GenBank Accession

QED21726.1

Full name

Uncharacterized protein H233R

Sequence

CDS

ATGATCCTCATAGCGAGCCCGTTCTCGCTGGCGCATCTTGAATATCTTCATACGTGGCACGTCACCATCAAAAACATTGCCCAACAGCACGGGCTTGATATAAAGGTGGCCATTGTGGTCTCAACATCGCATTTAAATAATTTTTTGCCAATTTCCGGGGCGCTTAACATCGAATGTATAACCTTCCCCAGTTGCGGCATCAAGGAGATAGACCTCCTATGGGCGCGCATTAAACTATTTCAACATTACTGCGCCATCGGTGCCCGTCTTTTATGGCTGGTAAGTGCTGACATCAGGCCCCCTGTTTCAGCGTGGCCAGCCATCGCCGACAGTCTAAAAAAGGGAGCAGATGCGGTCGTTATTCCCTACCCCTCCCGATGGAACAATCTTATACCTACCGTCATCAAAGAAATA

Protein

MILIASPFSLAHLEYLHTWHVTIKNIAQQHGLDIKVAIVVSTSHLNNFLPISGALNIECITFPSCGIKEIDLLWARIKLFQHYCAIGARLLWLVSADIRPPVSAWPAIADSLKKGADAVVIPYPSRWNNLIPTVIKEI

Summary

Similarity

Belongs to the asfivirus H233R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein H233R

Uniprot

A0A5B8XDD7 A9JLA0 D4I5E2 A9JM35 E0WM68 A0A0A1E0D1 + More
Q65189 A0A3Q9CZ92 P0CAA5 P0CAA6 Q65234 P0CAA4 A0A0C5B297 A0A0C5B2Q5 A0A2Z5DEJ8

Pubmed

18198370 21470447 25406173 26618713 11831707 30547827 + More
8021596 25645905

EMBL

MN194591 QED21726.1 AM712239 CAN10218.1 FN557520 CBH29218.1 + More
AM712240 CAN10467.1 FR682468 CBW46784.1 KM262844 KM262845 KM102979 KP055815 KX354450 MG939583 MG939588 LS478113 AIY22309.1 AIY22467.1 AJZ77125.1 AKO62799.1 AOO54484.1 AXZ95891.1 AXZ96174.1 SPS73541.1 U18466 MH910495 AZP54045.1 AY261363 AY261366 X71982 AY261361 AY261360 KM111294 AJL34131.1 KM111295 AJL34296.1 MH025916 MH025917 MH025918 MH025919 MH025920 AXB49347.1 AXB49521.1 AXB49693.1 AXB49864.1 AXB50037.1

Proteomes

UP000321214 UP000130745 UP000101090 UP000108903 UP000141072 UP000110401 + More
UP000117635 UP000142390 UP000241813 UP000266411 UP000000624 UP000000859 UP000000858 UP000000860 UP000000861 UP000105860 UP000101566

ProteinModelPortal

A0A5B8XDD7 A9JLA0 D4I5E2 A9JM35 E0WM68 A0A0A1E0D1 + More
Q65189 A0A3Q9CZ92 P0CAA5 P0CAA6 Q65234 P0CAA4 A0A0C5B297 A0A0C5B2Q5 A0A2Z5DEJ8

Ontologies

KEGG

vg:22220348

Subcellular Location

From MSLVP

Multi-Pass Membrane

Topology

Length:

138

Number of predicted TMHs:

Exp number of AAs in TMHs:

0.0279

Exp number, first 60 AAs:

0.01117

Total prob of N-in:

0.01780

outside

1 - 138

Population Genetic Test Statistics

0.0393135

Theta

0.0420972

Tajima's D

-0.5499592

CLR

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein Protein	QED21726.1 AKO62799.1
China_AnhuiXCGQ_2018	Protein Protein	QED21726.1 AYW34089.1
China_ASFV-SY18_2018
Poland_Pol16_20186_o7_2016-2017	Protein Protein	QED21726.1 AXZ95891.1
Poland_Pol16_20538_o9_2016-2017	Protein Protein	AXB49347.1 QED21726.1
Poland_Pol16_20540_o10_2016-2017	Protein Protein	AXB49347.1 QED21726.1
Poland_Pol16_29413_o23_2016-2017	Protein Protein	AXB49347.1 QED21726.1
Poland_Pol17_03029_C201_2016-2017	Protein Protein	AXB49347.1 QED21726.1
Poland_Pol17_04461_C210_2016-2017	Protein Protein	QED21726.1 AXZ96174.1
Poland_Pol17_05838_C220_2016-2017	Protein Protein	AXB49347.1 QED21726.1
Poland_ASFV_POL_Podlaskie_2015	Protein Protein	AXB49347.1 QED21726.1
Uganda_R8_2015	Protein	QED21726.1
Uganda_R7_2015	Protein	QED21726.1
Uganda_R25_2015	Protein	QED21726.1
Uganda_N10_2015	Protein	QED21726.1
Uganda_R35_2015	Protein	QED21726.1
Estonia_2014	Protein Protein	QED21726.1 SPS73541.1
Italy_26544_OG10_2010	Protein Protein	QED21726.1 AJZ77125.1
Italy_47_Ss_2008_2008	Protein Protein	QED21726.1 AOO54484.1
Portugal_OURT_88.3_1988	Protein Protein	QED21726.1 CAN10467.1
Spain_E75_1975	Protein Protein	QED21726.1 CBH29218.1
Russia_Georgia_2007	Protein Protein	QED21726.1 CBW46784.1
Kenya_Tk1_2005	Protein	QED21726.1
Kenya_Bus_2006	Protein	QED21726.1
Russia_Odintsovo_2014	Protein Protein	AXB49347.1 QED21726.1
Portugal_L60_1960	Protein Protein	QED21726.1 AIY22309.1
Portugal_NHV_1968	Protein Protein	QED21726.1 AIY22467.1
Russia_Kashino_2013	Protein Protein	AXB49347.1 QED21726.1
Benin_1997	Protein Protein	QED21726.1 CAN10218.1
South_Africa_KNP_Pretorisuskop_1996	Protein Protein	AXB49347.1 QED21726.1
South_Africa_MGR_Mkuzi_1979	Protein Protein	AXB49347.1 QED21726.1
Malawi_Lil_1983	Protein	QED21726.1
Kenya_1950	Protein	QED21726.1
Namibia_Warthog_1980	Protein Protein	AXB49347.1 QED21726.1
South_Africa_Warmbaths_1987	Protein Protein	AXB49347.1 QED21726.1
Malawi_Tengani_1962	Protein Protein	AXB49347.1 QED21726.1
China_HLJ_2018	Protein Protein	QED21726.1 QBH90606.1
China_LN_2018	Protein Protein	QED21726.1 QBH90791.1
China_wbBS01_2018	Protein Protein	QED21726.1 QDL88149.1
Ukraine_Kyiv_2014	Protein	QED21727.1
Belgium_Etalle_wb_2018	Protein Protein	QED21726.1 QED90561.1
Lithuania_LT14_2014	Protein Protein	QED21726.1 QEY87924.1
South_Africa_1985	Protein Protein	QED21726.1 QGM12937.1
South_Africa_2_2008	Protein Protein Protein	QED21726.1 QGM12863.1 QGM12863.1
Zambia_LIV_1983	Protein Protein	QED21726.1 QGM12756.1