Strain
Poland_Pol17_05838_C220_2016-2017
(Region: Poland; Strain: Pol17_05838_C220; Date: 2016-2017)
Gene
ASFV_G_ACD_00210
Description
Annoated by sequence mapping,
ASFV_G_ACD_00210
Location
GenBank Accession
Sequence
CDS
ATGGCTGCAACTTATAAGTTGCAACTTATGGGTTGCAATACTGCAACGTATAGGTTGCACCTTATAGATCGCGACTCAAAAGGTATGAAAACCTTACCCTCAATACAGAATTTAAGTTTTAATCCTGATAATGTATCTGTTTATGAAAAAAAATTTTTTTTACTCATGTATGAATTCTTATACGAATCATAA
Protein
MAATYKLQLMGCNTATYRLHLIDRDSKGMKTLPSIQNLSFNPDNVSVYEKKFFLLMYEFLYESX
Summary
Uniprot
Pubmed
EMBL
Proteomes
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
64
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00576999999999999
Exp number, first 60 AAs:
0.00571999999999999
Total prob of N-in:
0.38971
outside
1 - 64
Population Genetic Test Statistics
Pi
0.1629355
Theta
0.274795
Tajima's D
-1.5394937
CLR
1.321407
Interpretation
No evidence of Selection
Multiple alignment of Orthologues
Gene Tree
Orthologous in Strains
| Strain | Availability | Status | Gene |
|---|---|---|---|
| Spain_BA71_1971 | |||
| China_AnhuiXCGQ_2018 |
Protein |
AYW33979.1 |
|
| China_ASFV-SY18_2018 |
Protein Protein |
AXZ95783.1 CBW46663.1 |
|
| Poland_Pol16_20186_o7_2016-2017 |
Protein Protein |
CBW46663.1 AXZ95783.1 |
|
| Poland_Pol16_20538_o9_2016-2017 |
Protein Protein |
CBW46663.1 AXZ95936.1 |
|
| Poland_Pol16_20540_o10_2016-2017 |
Protein |
CBW46663.1 |
|
| Poland_Pol16_29413_o23_2016-2017 |
Protein Protein |
CBW46663.1 AXZ95963.1 |
|
| Poland_Pol17_03029_C201_2016-2017 |
Protein Protein |
CBW46663.1 AXZ95980.1 |
|
| Poland_Pol17_04461_C210_2016-2017 |
Protein Protein |
CBW46663.1 AXZ96075.1 |
|
| Poland_Pol17_05838_C220_2016-2017 |
Protein |
CBW46663.1 |
|
| Poland_ASFV_POL_Podlaskie_2015 |
Protein |
CBW46663.1 |
|
| Uganda_R8_2015 | |||
| Uganda_R7_2015 | |||
| Uganda_R25_2015 | |||
| Uganda_N10_2015 | |||
| Uganda_R35_2015 | |||
| Estonia_2014 | |||
| Italy_26544_OG10_2010 | |||
| Italy_47_Ss_2008_2008 | |||
| Portugal_OURT_88.3_1988 | |||
| Spain_E75_1975 | |||
| Russia_Georgia_2007 |
Protein Protein |
CBW46663.1 CBW46663.1 |
|
| Kenya_Tk1_2005 | |||
| Kenya_Bus_2006 | |||
| Russia_Odintsovo_2014 |
Protein |
CBW46663.1 |
|
| Portugal_L60_1960 | |||
| Portugal_NHV_1968 | |||
| Russia_Kashino_2013 |
Protein |
CBW46663.1 |
|
| Benin_1997 | |||
| South_Africa_KNP_Pretorisuskop_1996 | |||
| South_Africa_MGR_Mkuzi_1979 | |||
| Malawi_Lil_1983 | |||
| Kenya_1950 | |||
| Namibia_Warthog_1980 |
Protein |
CBW46663.1 |
|
| South_Africa_Warmbaths_1987 |
Protein |
CBW46663.1 |
|
| Malawi_Tengani_1962 | |||
| China_HLJ_2018 |
Protein |
QBH90486.1 |
|
| China_LN_2018 |
Protein |
QBH90671.1 |
|
| China_wbBS01_2018 |
Protein |
QDL88028.1 |
|
| Ukraine_Kyiv_2014 |
Protein |
CBW46663.1 |
|
| Belgium_Etalle_wb_2018 |
Protein |
QED90443.1 |
|
| Lithuania_LT14_2014 |
Protein |
QEY87802.1 |
|
| South_Africa_1985 |
Protein |
CBW46663.1 |
|
| South_Africa_2_2008 |
Protein |
CBW46663.1 |
|
| Zambia_LIV_1983 |
Protein |
CBW46663.1 |
