ASFVdb The African Swine Fever Virus Database
Strain
Poland_Pol17_05838_C220_2016-2017 (Region: Poland;  Strain: Pol17_05838_C220;  Date: 2016-2017)
Gene
BA71V-O61R (p12)
Description
With frameshift mutation but translatable,  similar to African swine fever virus E75 strain E75 of INSD accession FN557520
GenBank Accession
Full name
Virus attachment protein p12      
Alternative Name
Protein p12
 

Sequence

CDS
ATGGCACTTGATGGTTCAAGTGGTGGAGGCTCTAATGTAGAAACATTACTTATAGTAGCAATCATTGTGGTTATTATGGCAATCATGCTTTACTATTTTTGGTGGATGCCCCGCCAGCAAAAAAAATGTAGCAAGGCTGAAGAATGCACATGTAATAACGGAAGCTGTTCCCTAAAAACAAGTTAA
Protein
MALDGSSGGGSNVETLLIVAIIVVIMAIMLYYFWWMPRQQKKCSKAEECTCNNGSCSLKTSX

Summary

Function
Virus attachment protein.
Subunit
Homomultimer; disulfide-linked.
Similarity
Belongs to the asfivirus attachment protein p12 family.
Keywords
Complete proteome   Disulfide bond   Membrane   Transmembrane   Transmembrane helix   Viral envelope protein   Virion   Reference proteome  
Feature
chain  Virus attachment protein p12
EMBL
KM111294    AJL34111.1    M84183    AAA42726.1    M84184    AAA42727.1    + More
AY261361    KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    AJL34276.1    AXB49326.1    AXB49500.1    AXB49672.1    AXB49843.1    AXB50016.1    AY261360    M84177    AAA42724.1    AM712239    CAN10197.1    FN557520    CBH29198.1    AM712240    CAN10447.1    FR682468    CBW46764.1    JQ771676    JQ771677    JQ771679    JQ771680    KJ380913    KM262844    KM262845    KM102979    KP055815    KX354450    KU641698    KU641699    KU641700    KU641701    KU641702    KU641703    KU641704    KU641706    KU641707    KU641708    KU641709    KU641710    KU641711    KU641712    KU641713    KU641714    KU641715    KU641716    KU641717    KU641718    MG939583    MG939588    LS478113    AFD34338.1    AFD34339.1    AFD34341.1    AFD34342.1    AHN94310.1    AIY22289.1    AIY22447.1    AJZ77192.1    AKO62779.1    AOO54448.1    APF30068.1    APF30069.1    APF30070.1    APF30071.1    APF30072.1    APF30073.1    APF30074.1    APF30076.1    APF30077.1    APF30078.1    APF30079.1    APF30080.1    APF30081.1    APF30082.1    APF30083.1    APF30084.1    APF30085.1    APF30086.1    APF30087.1    APF30088.1    AXZ95872.1    AXZ96155.1    SPS73521.1    AY261366    AY261363    M84178    M84186    U18466    M84185    AAA42728.1    JQ771678    AFD34340.1    KU641705    APF30075.1   

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane
From Uniprot
Virion membrane  

Topology

Length:
62
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.75218
Exp number, first 60 AAs:
21.75218
Total prob of N-in:
0.00972
POSSIBLE N-term signal
sequence
outside
1  -  12
TMhelix
13  -  35
inside
36  -  62
 
 

Population Genetic Test Statistics

Pi
0.0186324
Theta
0.0270553
Tajima's D
-0.9019928
CLR
0.094251
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62779.1
China_AnhuiXCGQ_2018 Protein
AYW34069.1
China_ASFV-SY18_2018 Protein
AJL34111.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95872.1
Poland_Pol16_20538_o9_2016-2017 Protein
AJL34111.1
Poland_Pol16_20540_o10_2016-2017 Protein
AJL34111.1
Poland_Pol16_29413_o23_2016-2017 Protein
AJL34111.1
Poland_Pol17_03029_C201_2016-2017 Protein
AJL34111.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96155.1
Poland_Pol17_05838_C220_2016-2017 Protein
AJL34111.1
Poland_ASFV_POL_Podlaskie_2015 Protein
AJL34111.1
Uganda_R8_2015 Protein
AXB49326.1
Uganda_R7_2015 Protein
AXB49500.1
Uganda_R25_2015 Protein
AXB49672.1
Uganda_N10_2015 Protein
AXB49843.1
Uganda_R35_2015 Protein
AXB50016.1
Estonia_2014 Protein
SPS73521.1
Italy_26544_OG10_2010 Protein
AJZ77192.1
Italy_47_Ss_2008_2008 Protein
AOO54448.1
Portugal_OURT_88.3_1988 Protein
CAN10447.1
Spain_E75_1975 Protein
CBH29198.1
Russia_Georgia_2007 Protein
CBW46764.1
Kenya_Tk1_2005 Protein
AJL34111.1
Kenya_Bus_2006 Protein
AJL34276.1
Russia_Odintsovo_2014 Protein
AJL34111.1
Portugal_L60_1960 Protein
AIY22289.1
Portugal_NHV_1968 Protein
AIY22447.1
Russia_Kashino_2013 Protein
AJL34111.1
Benin_1997 Protein
CAN10197.1
South_Africa_KNP_Pretorisuskop_1996 Protein
AJL34111.1
South_Africa_MGR_Mkuzi_1979 Protein
AJL34111.1
Malawi_Lil_1983 Protein
AJL34111.1
Kenya_1950 Protein
AJL34111.1
Namibia_Warthog_1980 Protein
AJL34111.1
South_Africa_Warmbaths_1987 Protein
AJL34111.1
Malawi_Tengani_1962 Protein
AJL34111.1
China_HLJ_2018 Protein
QBH90586.1
China_LN_2018 Protein
QBH90771.1
China_wbBS01_2018 Protein
QDL88129.1
Ukraine_Kyiv_2014 Protein
QED21692.1
Belgium_Etalle_wb_2018 Protein
QED90541.1
Lithuania_LT14_2014 Protein
QEY87904.1
South_Africa_1985 Protein
QGM12927.1
South_Africa_2_2008 Protein
QGM12853.1
Zambia_LIV_1983 Protein
QGM12740.1
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