ASFVdb The African Swine Fever Virus Database
Strain
Poland_Pol17_03029_C201_2016-2017 (Region: Poland;  Strain: Pol17_03029_C201;  Date: 2016-2017)
Gene
EP153R
Description
Annotated in NCBI,  EP153R
GenBank Accession
Full name
Lectin-like protein EP153R      
 

Sequence

CDS
ATGTTTTCTAACAAAAAGTACATCGGTCTTATCAATAAGAAGGAGGGTTTGAAAAAAAAAATAGATGATTATAGTATATTAATAATTGGAATATTAATTGGAACTAACATCTTAAGCCTTATTATAAATATAATAGGAGAGATTAATAAACCAATATGTTACCAAAATGATGATAAGATATTTTATTGCCCTAAAGATTGGGTTGGATATAATAATGTTTGTTATTATTTTGGCAATGAAGAAAAAAATTATAATAATGCAAGTAATTATTGTAAGCAATTAAATAGTACGCTTACTAATAATAATACTATTTTAGTAAATCTTACTAAAACATTAAATCTTACTAAAACATATAATCACGAATCTAATTATTGGGTTAATTATTCTTTAATTAAAAATGAGTCAGTACTATTACGTGATAGTGGATATTACAAAAAACAAAAACATGTAAGTTTATTATATATTTGTAGTAAATAA
Protein
MFSNKKYIGLINKKEGLKKKIDDYSILIIGILIGTNILSLIINIIGEINKPICYQNDDKIFYCPKDWVGYNNVCYYFGNEEKNYNNASNYCKQLNSTLTNNNTILVNLTKTLNLTKTYNHESNYWVNYSLIKNESVLLRDSGYYKKQKHVSLLYICSK

Summary

Function
Participates to viral hemadsorption, which may help viral spread. Reduces the transactivating activity of host TP53, thus inhibiting apoptosis (By similarity). Non-essential for virus growth in swine macrophage cell cultures (By similarity).
Participates to viral hemadsorption, which may help viral spread. Reduces the transactivating activity of host TP53, thus inhibiting apoptosis (By similarity). Non-essential for virus growth in swine macrophage cell cultures (PubMed:10573162).
Similarity
Belongs to the asfivirus lectin-like protein family.
Keywords
Complete proteome   Glycoprotein   Host membrane   Host-virus interaction   Lectin   Membrane   Modulation of host cell apoptosis by virus   Signal-anchor   Transmembrane   Transmembrane helix   Late protein  
Feature
chain  Lectin-like protein EP153R
EMBL
FR682468    CBW46723.1    KM609342    KM609360    KM609362    KM609363    + More
KU752730    KU752731    KU752732    KU752733    KU752734    KU752735    KU752736    KU752737    KU752738    KU752739    KU752740    KU752741    KU752742    KU752743    KU752744    KU752745    KU752746    KU752747    KU752748    KU752749    KU752750    KU752751    KU752752    KU752753    KU752754    KU752755    KU752756    KU752757    KU752758    KU752759    KU752760    KU752761    KU752762    KU752763    KU752764    KU752765    KU752766    KU752767    KU752768    KU752769    KU752770    KU752771    KU752772    KU752773    KU752774    KU752775    KU752776    KU752777    KU752778    KU752779    KU752780    KU752781    KU752782    KU752783    KU752784    KU752785    KU752786    KU752787    KU752788    KU752789    KU752790    KU752791    KU752792    KU752793    KU752794    KU752795    KU752796    MG939583    MG939587    MG939588    LS478113    AJB28370.1    AJB28402.1    AJB28406.1    AJB28408.1    ANC98852.1    ANC98853.1    ANC98854.1    ANC98855.1    ANC98856.1    ANC98857.1    ANC98858.1    ANC98859.1    ANC98860.1    ANC98861.1    ANC98862.1    ANC98863.1    ANC98864.1    ANC98865.1    ANC98866.1    ANC98867.1    ANC98868.1    ANC98869.1    ANC98870.1    ANC98871.1    ANC98872.1    ANC98873.1    ANC98874.1    ANC98875.1    ANC98876.1    ANC98877.1    ANC98878.1    ANC98879.1    ANC98880.1    ANC98881.1    ANC98882.1    ANC98883.1    ANC98884.1    ANC98885.1    ANC98886.1    ANC98887.1    ANC98888.1    ANC98889.1    ANC98890.1    ANC98891.1    ANC98892.1    ANC98893.1    ANC98894.1    ANC98895.1    ANC98896.1    ANC98897.1    ANC98898.1    ANC98899.1    ANC98900.1    ANC98901.1    ANC98902.1    ANC98903.1    ANC98904.1    ANC98905.1    ANC98906.1    ANC98907.1    ANC98908.1    ANC98909.1    ANC98910.1    ANC98911.1    ANC98912.1    ANC98913.1    ANC98914.1    ANC98915.1    ANC98916.1    ANC98917.1    ANC98918.1    AXZ95832.1    AXZ96020.1    AXZ96115.1    SPS73480.1    AY261366    AF017039    KM609339    KM609341    KM609356    KM609357    AAC28424.1    AJB28365.1    AJB28368.1    AJB28395.1    AJB28397.1    AF017028    AAC28413.1    KM609349    AJB28383.1    KM609359    AJB28400.1    AF017027    AAC28412.1    KM609340    KM609343    KM609344    KM609345    AJB28367.1    AJB28372.1    AJB28374.1    AJB28376.1    AF017035    KM609354    AAC28420.1    AJB28391.1    AY261361    AF017029    AAC28414.1    KM609346    KM609347    AJB28377.1    AJB28379.1   
Pfam
PF05473   UL45
Interpro
IPR016186   C-type_lectin-like/link_sf
IPR008646   Herpes_UL45-like
IPR016187   CTDL_fold
SUPFAM
SSF56436   SSF56436
Gene 3D
PDB
3FF7     E-value=0.00582356,     Score=88

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane  

Topology

Length:
158
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.39387
Exp number, first 60 AAs:
22.38657
Total prob of N-in:
0.34369
POSSIBLE N-term signal
sequence
outside
1  -  23
TMhelix
24  -  46
inside
47  -  158
 
 

Population Genetic Test Statistics

Pi
0.1374284
Theta
0.1847626
Tajima's D
-0.8279399
CLR
1.511079
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971    
China_AnhuiXCGQ_2018 Protein
AYW34029.1
China_ASFV-SY18_2018 Protein
CBW46723.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95832.1
Poland_Pol16_20538_o9_2016-2017 Protein
CBW46723.1
Poland_Pol16_20540_o10_2016-2017 Protein
CBW46723.1
Poland_Pol16_29413_o23_2016-2017 Protein
CBW46723.1
Poland_Pol17_03029_C201_2016-2017 Protein
AXZ96020.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96115.1
Poland_Pol17_05838_C220_2016-2017 Protein
CBW46723.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CBW46723.1
Uganda_R8_2015    
Uganda_R7_2015    
Uganda_R25_2015    
Uganda_N10_2015    
Uganda_R35_2015    
Estonia_2014 Protein
SPS73480.1
Italy_26544_OG10_2010    
Italy_47_Ss_2008_2008    
Portugal_OURT_88.3_1988    
Spain_E75_1975    
Russia_Georgia_2007 Protein
CBW46723.1
Kenya_Tk1_2005    
Kenya_Bus_2006    
Russia_Odintsovo_2014 Protein
CBW46723.1
Portugal_L60_1960    
Portugal_NHV_1968    
Russia_Kashino_2013 Protein
CBW46723.1
Benin_1997    
South_Africa_KNP_Pretorisuskop_1996    
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983    
Kenya_1950    
Namibia_Warthog_1980 Protein
CBW46723.1
South_Africa_Warmbaths_1987    
Malawi_Tengani_1962    
China_HLJ_2018 Protein
QBH90545.1
China_LN_2018 Protein
QBH90730.1
China_wbBS01_2018 Protein
QDL88088.1
Ukraine_Kyiv_2014 Protein
QED21621.1
Belgium_Etalle_wb_2018 Protein
QED90500.1
Lithuania_LT14_2014 Protein
QEY87863.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
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