Strain

Poland_Pol17_03029_C201_2016-2017 (Region: Poland; Strain: Pol17_03029_C201; Date: 2016-2017)

Gene

MGF_110-7L

Description

Annotated in NCBI, MGF_110-7L

Location

MG939587.1(-):9357-9770

GenBank Accession

AXZ95976.1

CDS

ATGCTGGTGATTATCCTGGGAATTATTGGCCTGCTGGCCAGTAGCAACCTGGTTTCATCTTCCACTTCTACTCGGGTAGGTGGACATCTTCCTCTAACATTTGAACCCCCAGAGAATGAACTTGGATACTGGTGCACTTATGTGGAAAGCTGTCGGTTCTGCTGGGATTGTGAAGATGGGATTTGTACCAGCAGGGTTTGGGGAAACAACTCCACAAGTATTATTGAGAATGACTATGTAAAATATTGTGAGGTTTCCCGCTGGGGTGACCTATGTAGATATGATGTGGAGGAGCACATTTACCATAGCATGAACTGTTCTGACCCAAAGCCCTGGAATCCTTATAAAATTGCAAGGAAGGAGTGGAAAAAGAATGAACATCCCAGAAAGGATTTGAAAAAAGATGAATTCTAG

Protein

MLVIILGIIGLLASSNLVSSSTSTRVGGHLPLTFEPPENELGYWCTYVESCRFCWDCEDGICTSRVWGNNSTSIIENDYVKYCEVSRWGDLCRYDVEEHIYHSMNCSDPKPWNPYKIARKEWKKNEHPRKDLKKDEF

Uniprot

NA

ProteinModelPortal

NA

PDB

2C5A E-value=6.53683, Score=60

Ontologies

Subcellular Location

From MSLVP

Single-Pass Membrane

Topology

Length:

137

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.99054

Exp number, first 60 AAs:

2.99054

Total prob of N-in:

0.15015

outside

1 - 137

Population Genetic Test Statistics

Pi

0.128147

Theta

0.2198309

Tajima's D

-1.4742114

CLR

1.120624

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971
China_AnhuiXCGQ_2018	Protein	AYW33960.1
China_ASFV-SY18_2018	Protein	CBW46657.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95779.1
Poland_Pol16_20538_o9_2016-2017	Protein	CBW46657.1
Poland_Pol16_20540_o10_2016-2017	Protein	CBW46657.1
Poland_Pol16_29413_o23_2016-2017	Protein	AXZ95959.1
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ95976.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96071.1
Poland_Pol17_05838_C220_2016-2017	Protein	CBW46657.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CBW46657.1
Uganda_R8_2015	Protein	AXB49232.1
Uganda_R7_2015	Protein	AXB49405.1
Uganda_R25_2015	Protein	AXB49579.1
Uganda_N10_2015	Protein	AXB49751.1
Uganda_R35_2015	Protein	AXB49922.1
Estonia_2014
Italy_26544_OG10_2010
Italy_47_Ss_2008_2008
Portugal_OURT_88.3_1988
Spain_E75_1975
Russia_Georgia_2007	Protein	CBW46657.1
Kenya_Tk1_2005	Protein	AJL34018.1
Kenya_Bus_2006
Russia_Odintsovo_2014	Protein	CBW46657.1
Portugal_L60_1960
Portugal_NHV_1968
Russia_Kashino_2013	Protein	CBW46657.1
Benin_1997
South_Africa_KNP_Pretorisuskop_1996	Protein	CBW46657.1
South_Africa_MGR_Mkuzi_1979	Protein	CBW46657.1
Malawi_Lil_1983	Protein	CBW46657.1
Kenya_1950	Protein	CBW46657.1
Namibia_Warthog_1980	Protein	CBW46657.1
South_Africa_Warmbaths_1987	Protein	CBW46657.1
Malawi_Tengani_1962
China_HLJ_2018	Protein	QBH90480.1
China_LN_2018	Protein	QBH90665.1
China_wbBS01_2018	Protein	QDL88023.1
Ukraine_Kyiv_2014	Protein	QED21551.1
Belgium_Etalle_wb_2018	Protein	QED90437.1
Lithuania_LT14_2014	Protein	QEY87796.1
South_Africa_1985	Protein	CBW46657.1
South_Africa_2_2008	Protein	CBW46657.1
Zambia_LIV_1983	Protein	CBW46657.1

Sequence