Strain

Poland_Pol16_20538_o9_2016-2017 (Region: Poland; Strain: Pol16_20538_o9; Date: 2016-2017)

Gene

pE146L

Description

Annoated by sequence mapping, putative transmembrane protein

Location

MG939584.1(-):165207-165647

GenBank Accession

CAN10228.1

Full name

Uncharacterized protein E146L

CDS

ATGGGCGGCACTACAGACTTTGTGTTGTCTATAACTATTGTGTTGGTTATTTTAATTATTATTGCTTTCATTTGGTATAATTTTACCGGATGGTCCCCCTTTAAGTACAGCAAGGGGAACACTGTTACCTTCAAAACCCCCGATGAATCGTCCATCGCATACATGCGCTTTAGAAACTGCGTCTTTACATTCACGGATCCCAAGGGATCCCTTCACTCGATTGACGTAACCGAAGTGTTAAACAACATGGCTAAGGGATTTCGGGATGCGCAAAATCCTCCGAGCTCCTTCACGCTGGGCGGGCATTGCCAAGCCCCGCTGAACGCCTTTAGCTTTGTCTTACCGGGCGTAAATGATAGGGCAACGGTGGCCACCGCCGACGAGGCAAAAAAATGGGAAAACTGTGACGCAACCCTGACCGGACTACAGCGTATTATTTAG

Protein

MGGTTDFVLSITIVLVILIIIAFIWYNFTGWSPFKYSKGNTVTFKTPDESSIAYMRFRNCVFTFTDPKGSLHSIDVTEVLNNMAKGFRDAQNPPSSFTLGGHCQAPLNAFSFVLPGVNDRATVATADEAKKWENCDATLTGLQRII

Similarity

Belongs to the asfivirus E146L family.

Keywords

Complete proteome Host membrane Membrane Reference proteome Transmembrane Transmembrane helix

Feature

chain Uncharacterized protein E146L

Uniprot

A9JLB8 D4I5F2 A9JM55 A0A0A1E0E2 Q65197 E0WM78 + More
A0A2X0S7E9 P0CA53 P0CA54 Q65240 A0A0C5B2A4 P0CA52 A0A0C5B2R5

Pubmed

18198370 25406173 26618713 11831707 21470447 8021596 + More
25645905

EMBL

AM712239 CAN10228.1 FN557520 CBH29228.1 AM712240 CAN10477.1 + More
KM262844 KM262845 KM102979 KP055815 KX354450 AIY22319.1 AIY22477.1 AJZ77156.1 AKO62809.1 AOO54497.1 U18466 FR682468 CBW46794.1 MG939583 MG939588 LS478113 AXZ95900.1 AXZ96183.1 SPS73551.1 AY261363 AY261366 X71982 AY261361 KM111294 AJL34141.1 AY261360 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34306.1 AXB49357.1 AXB49531.1 AXB49703.1 AXB49874.1 AXB50047.1

Proteomes

UP000130745 UP000101090 UP000108903 UP000110401 UP000117635 UP000142390 + More
UP000241813 UP000266411 UP000000624 UP000141072 UP000000859 UP000000858 UP000000860 UP000105860 UP000000861 UP000101566

ProteinModelPortal

A9JLB8 D4I5F2 A9JM55 A0A0A1E0E2 Q65197 E0WM78 + More
A0A2X0S7E9 P0CA53 P0CA54 Q65240 A0A0C5B2A4 P0CA52 A0A0C5B2R5

PDB

4I84 E-value=6.41705, Score=61

Ontologies

KEGG

vg:22220357

GO

GO:0016021 C:integral component of membrane
GO:0033644 C:host cell membrane

Subcellular Location

From MSLVP

Single-Pass Membrane

From Uniprot

Host membrane

Topology

Length:

146

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.4421

Exp number, first 60 AAs:

22.1892

Total prob of N-in:

0.93920

POSSIBLE N-term signal

sequence

inside

1 - 6

TMhelix

7 - 29

outside

30 - 146

Population Genetic Test Statistics

Pi

0.043761

Theta

0.0580467

Tajima's D

-0.8461646

CLR

0.119821

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62809.1
China_AnhuiXCGQ_2018	Protein	AYW34099.1
China_ASFV-SY18_2018	Protein	AKO62809.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95900.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10228.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10228.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10228.1
Poland_Pol17_03029_C201_2016-2017	Protein	CAN10228.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96183.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10228.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10228.1
Uganda_R8_2015	Protein	AXB49357.1
Uganda_R7_2015	Protein	AXB49531.1
Uganda_R25_2015	Protein	AXB49703.1
Uganda_N10_2015	Protein	AXB49874.1
Uganda_R35_2015	Protein	AXB50047.1
Estonia_2014	Protein	SPS73551.1
Italy_26544_OG10_2010	Protein	AJZ77156.1
Italy_47_Ss_2008_2008	Protein	AOO54497.1
Portugal_OURT_88.3_1988	Protein	CAN10477.1
Spain_E75_1975	Protein	CBH29228.1
Russia_Georgia_2007	Protein	CBW46794.1
Kenya_Tk1_2005	Protein	AJL34141.1
Kenya_Bus_2006	Protein	AJL34306.1
Russia_Odintsovo_2014	Protein	CAN10228.1
Portugal_L60_1960	Protein	AIY22319.1
Portugal_NHV_1968	Protein	AIY22477.1
Russia_Kashino_2013	Protein	CAN10228.1
Benin_1997	Protein Protein	CAN10228.1 CAN10228.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10228.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10228.1
Malawi_Lil_1983	Protein	CAN10228.1
Kenya_1950	Protein	CAN10228.1
Namibia_Warthog_1980	Protein	CAN10228.1
South_Africa_Warmbaths_1987	Protein	CAN10228.1
Malawi_Tengani_1962	Protein	CAN10228.1
China_HLJ_2018	Protein	QBH90616.1
China_LN_2018	Protein	QBH90801.1
China_wbBS01_2018	Protein	QDL88159.1
Ukraine_Kyiv_2014	Protein	QED21741.1
Belgium_Etalle_wb_2018	Protein	QED90571.1
Lithuania_LT14_2014	Protein	QEY87934.1
South_Africa_1985	Protein	CAN10228.1
South_Africa_2_2008	Protein	CAN10228.1
Zambia_LIV_1983	Protein	CAN10228.1

Sequence