Strain

Poland_Pol16_20538_o9_2016-2017 (Region: Poland; Strain: Pol16_20538_o9; Date: 2016-2017)

Gene

pB66L

Description

Annoated by sequence mapping, putative transmembrane protein

Location

MG939584.1(-):108931-109131

GenBank Accession

CAN10187.1

Full name

Transmembrane protein B66L

Sequence

CDS

ATGGATATAAAAAGAGCACTTATCCTTTTTTTACTATTTTTAGTCGTATTGAGCAATGCTTTTGTGGACTACATTATTAGCAATTTTAACCATGCCGTGACATGCAGAAAACCTACCTACTTTGGTATAGTTCTTCAAGGTATTTTTCTTGTTATTCTTTTTAGCATAGTCGATTACCTTATTAATGAAAACATTCTTTAA

Protein

MDIKRALILFLLFLVVLSNAFVDYIISNFNHAVTCRKPTYFGIVLQGIFLVILFSIVDYLINENIL

Summary

Similarity

Belongs to the asfivirus B66L family.

Keywords

Complete proteome Host membrane Membrane Signal Transmembrane Transmembrane helix Reference proteome

Feature

chain Transmembrane protein B66L

Uniprot

A9JL49 A9JLX9 E0WM38 A0A0A1E0A0 P0CAM3 P0CAM2 + More
P0CAM1 Q65176 A0A0C5B272 P0CAM0

Pubmed

18198370 21470447 25406173 26618713 11831707 25645905 + More

EMBL

AM712239 CAN10187.1 AM712240 CAN10437.1 FR682468 CBW46754.1 + More
KM262844 KM262845 KM102979 KP055815 KX354450 MG939583 MG939587 MG939588 LS478113 AIY22279.1 AIY22437.1 AJZ77190.1 AKO62769.1 AOO54429.1 AXZ95862.1 AXZ96050.1 AXZ96145.1 SPS73511.1 AY261366 AY261363 AY261361 U18466 KM111294 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34101.1 AJL34266.1 AXB49316.1 AXB49490.1 AXB49662.1 AXB49833.1 AXB50006.1 AY261360

Proteomes

UP000130745 UP000108903 UP000141072 UP000110401 UP000117635 UP000142390 + More
UP000241813 UP000266411 UP000000858 UP000000859 UP000000860 UP000000624 UP000101566 UP000105860 UP000000861

ProteinModelPortal

A9JL49 A9JLX9 E0WM38 A0A0A1E0A0 P0CAM3 P0CAM2 + More
P0CAM1 Q65176 A0A0C5B272 P0CAM0

Ontologies

KEGG

vg:22220317

GO:0016021 C:integral component of membrane
GO:0033644 C:host cell membrane

Subcellular Location

From MSLVP

Single-Pass Membrane

From Uniprot

Host membrane

Topology

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

43.83402

Exp number, first 60 AAs:

42.7423

Total prob of N-in:

0.92557

POSSIBLE N-term signal

sequence

inside

1 - 6

TMhelix

7 - 29

outside

30 - 38

TMhelix

39 - 61

inside

62 - 66

Population Genetic Test Statistics

0.0297502

Theta

0.0420983

Tajima's D

-0.8340836

CLR

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62769.1
China_AnhuiXCGQ_2018	Protein	AYW34059.1
China_ASFV-SY18_2018	Protein	AKO62769.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95862.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10187.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10187.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10187.1
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ96050.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96145.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10187.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10187.1
Uganda_R8_2015	Protein	AXB49316.1
Uganda_R7_2015	Protein	AXB49490.1
Uganda_R25_2015	Protein	AXB49662.1
Uganda_N10_2015	Protein	AXB49833.1
Uganda_R35_2015	Protein	AXB50006.1
Estonia_2014	Protein	SPS73511.1
Italy_26544_OG10_2010	Protein	AJZ77190.1
Italy_47_Ss_2008_2008	Protein	AOO54429.1
Portugal_OURT_88.3_1988	Protein	CAN10437.1
Spain_E75_1975
Russia_Georgia_2007	Protein	CBW46754.1
Kenya_Tk1_2005	Protein	AJL34101.1
Kenya_Bus_2006	Protein	AJL34266.1
Russia_Odintsovo_2014	Protein	CAN10187.1
Portugal_L60_1960	Protein	AIY22279.1
Portugal_NHV_1968	Protein	AIY22437.1
Russia_Kashino_2013	Protein	CAN10187.1
Benin_1997	Protein Protein	CAN10187.1 CAN10187.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10187.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10187.1
Malawi_Lil_1983	Genetic Remain	CAN10187.1
Kenya_1950	Protein	CAN10187.1
Namibia_Warthog_1980	Protein	CAN10187.1
South_Africa_Warmbaths_1987	Protein	CAN10187.1
Malawi_Tengani_1962	Protein	CAN10187.1
China_HLJ_2018	Protein	QBH90576.1
China_LN_2018	Protein	QBH90761.1
China_wbBS01_2018	Protein	QDL88119.1
Ukraine_Kyiv_2014	Protein	QED21675.1
Belgium_Etalle_wb_2018	Protein	QED90531.1
Lithuania_LT14_2014	Protein	QEY87894.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983	Protein	CAN10187.1