Strain

Poland_Pol16_20538_o9_2016-2017 (Region: Poland; Strain: Pol16_20538_o9; Date: 2016-2017)

Gene

pC129R

Description

Annoated by sequence mapping, VOCs Family: Unknown (BA71V-C129R)

Location

MG939584.1(+):80944-81333

GenBank Accession

CAN10162.1

Full name

Uncharacterized protein C129R

CDS

ATGGAACATCCATCTACAAACTATACTCCCGAACAGCAACACGAAAAATTAAAACATTATGTTTTAATCCCTAAACACCTTTGGTCTTATATTAAATACGGAACGCATGTCCGGTACTACACCACACAAAATGTTTTCCGAGTCGGTGGCTTTGTGCTTCAAAATCCCTACGAAGCCGTTATAAAAAATGAGGTAAAAACAGCAATAAGACTGCAAAATAGTTTTAACACAAAAGCGAAAGGGCATGTAACGTGGGCCGTCCCATATGATAATATTAGCAAGCTATATGCCAAACCAGATGCAATTATGCTTACCATACAAGAAAATGTTGAAAAAGCTCTTCATGCTTTAAACCAAAACGTACTGACGCTCGCATCAAAAATACGTTAA

Protein

MEHPSTNYTPEQQHEKLKHYVLIPKHLWSYIKYGTHVRYYTTQNVFRVGGFVLQNPYEAVIKNEVKTAIRLQNSFNTKAKGHVTWAVPYDNISKLYAKPDAIMLTIQENVEKALHALNQNVLTLASKIRX

Similarity

Belongs to the asfivirus C129R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein C129R

Uniprot

A9JL11 D4I5Q0 A9JLT2 A0A0A1DY40 Q65154 E0WMK0 + More
A0A2X0THR7 P0CA37 A0A0C5B253 P0CA36 A0A2Z5DGU6 A0A0C5B2J1 A0A2Z5DGI7 P0CA39 P0CA38

Pubmed

18198370 25406173 26618713 11831707 21470447 25645905 + More

EMBL

AM712239 CAN10162.1 FN557520 CBH29163.1 AM712240 CAN10410.1 + More
KM262844 KM262845 KM102979 KP055815 KX354450 AIY22254.1 AIY22412.1 AJZ77161.1 AKO62744.1 AOO54395.1 U18466 FR682468 CBW46728.1 MG939583 MG939587 MG939588 LS478113 AXZ95837.1 AXZ96025.1 AXZ96120.1 SPS73485.1 AY261361 KM111294 AJL34076.1 AY261360 MH025916 MH025917 MH025918 MH025920 AXB49291.1 AXB49465.1 AXB49637.1 AXB49981.1 KM111295 AJL34241.1 MH025919 AXB49808.1 AY261366 AY261363

Proteomes

UP000130745 UP000101090 UP000108903 UP000110401 UP000117635 UP000142390 + More
UP000241813 UP000266411 UP000000624 UP000141072 UP000000860 UP000105860 UP000000861 UP000101566 UP000000858 UP000000859

ProteinModelPortal

A9JL11 D4I5Q0 A9JLT2 A0A0A1DY40 Q65154 E0WMK0 + More
A0A2X0THR7 P0CA37 A0A0C5B253 P0CA36 A0A2Z5DGU6 A0A0C5B2J1 A0A2Z5DGI7 P0CA39 P0CA38

PDB

3DC6 E-value=0.128938, Score=75

Ontologies

KEGG

vg:22220292

Subcellular Location

From MSLVP

Single-Pass Membrane

Topology

Length:

130

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03935

Exp number, first 60 AAs:

0.03869

Total prob of N-in:

0.22444

outside

1 - 130

Population Genetic Test Statistics

Pi

0.0378562

Theta

0.0489238

Tajima's D

-0.8316303

CLR

0.119821

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62744.1
China_AnhuiXCGQ_2018	Protein	AYW34034.1
China_ASFV-SY18_2018	Protein	AKO62744.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95837.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10162.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10162.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10162.1
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ96025.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96120.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10162.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10162.1
Uganda_R8_2015	Protein	AXB49291.1
Uganda_R7_2015	Protein	AXB49465.1
Uganda_R25_2015	Protein	AXB49637.1
Uganda_N10_2015	Protein	AXB49808.1
Uganda_R35_2015	Protein	AXB49981.1
Estonia_2014	Protein	SPS73485.1
Italy_26544_OG10_2010	Protein	AJZ77161.1
Italy_47_Ss_2008_2008	Protein	AOO54395.1
Portugal_OURT_88.3_1988	Protein	CAN10410.1
Spain_E75_1975	Protein	CBH29163.1
Russia_Georgia_2007	Protein	CBW46728.1
Kenya_Tk1_2005	Protein	AJL34076.1
Kenya_Bus_2006	Protein	AJL34241.1
Russia_Odintsovo_2014	Protein	CAN10162.1
Portugal_L60_1960	Protein	AIY22254.1
Portugal_NHV_1968	Protein	AIY22412.1
Russia_Kashino_2013	Protein	CAN10162.1
Benin_1997	Protein Protein	CAN10162.1 CAN10162.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10162.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10162.1
Malawi_Lil_1983	Protein	CAN10162.1
Kenya_1950	Protein	CAN10162.1
Namibia_Warthog_1980	Protein	CAN10162.1
South_Africa_Warmbaths_1987	Protein	CAN10162.1
Malawi_Tengani_1962	Protein	CAN10162.1
China_HLJ_2018	Protein	QBH90550.1
China_LN_2018	Protein	QBH90735.1
China_wbBS01_2018	Protein	QDL88093.1
Ukraine_Kyiv_2014	Protein	QED21630.1
Belgium_Etalle_wb_2018	Protein	QED90505.1
Lithuania_LT14_2014	Protein	QEY87868.1
South_Africa_1985	Protein	QGM12915.1
South_Africa_2_2008	Protein	QGM12841.1
Zambia_LIV_1983	Protein	QGM12724.1

Sequence