ASFVdb The African Swine Fever Virus Database
Strain
Italy_47_Ss_2008_2008 (Region: Sardinia, Italy;  Strain: 47/Ss/2008;  Date: 2008)
Gene
A179L
Description
Annotated in NCBI,  apoptosis regulator Bcl-2-like protein
GenBank Accession
Full name
Apoptosis regulator Bcl-2 homolog      
Alternative Name
LMH-5W
 

Sequence

CDS
ATGGAGGGAGAAGAGTTAATATATCATAATATCATTAATGAAATACTAGTGGGTTATATTAAATATTACATTAATGATATTTCAGAGCATGAGCTTAGCCCATATCAACAACAAATAAAAAAAATTTTAACCTATTATGATGAGTGTTTGAACAAACAGGTTACAATTACCTTTTCTCTTACGAGTGTCCAAGAAATTAAAACCCAGTTTACTGGGGTTGTGACTGAGCTGTTTAAGGATCTTATCAACTGGGGTAGAATTTGTGGATTTATCGTCTTTTCTGCCAAGATGGCAAAGTATTGCAAAGACGCCAATAACCATCTGGAGTCCACGGTGATCACTACGGCATACAACTTCATGAAACACAACCTACTACCCTGGATGATTTCCCACGGCGGTCAAGAGGAGTTTTTGGCTTTCTCTCTACACAGTGACATGTATTCCGTGATTTTTAATATTAAATATTTCTTATCTAAATTTTGTAATCACATGTTTTTCAGATCCTGTGTACAGTTATTAAGAAACTGCAATTTGATATAG
Protein
MEGEELIYHNIINEILVGYIKYYINDISEHELSPYQQQIKKILTYYDECLNKQVTITFSLTSVQEIKTQFTGVVTELFKDLINWGRICGFIVFSAKMAKYCKDANNHLESTVITTAYNFMKHNLLPWMISHGGQEEFLAFSLHSDMYSVIFNIKYFLSKFCNHMFFRSCVQLLRNCNLI

Summary

Function
Suppresses apoptosis in host cell and thus facilitates production of progeny virions (PubMed:9123849, PubMed:18329683). Has the ability to potentially bind to all the members of the proapoptotic Bcl-2 family (PubMed:28053104, PubMed:18329683).
Suppresses apoptosis in host cell and thus facilitates production of progeny virions. Has the ability to potentially bind to all the members of the proapoptotic Bcl-2 family.
Subunit
Interacts with host BECN1 (PubMed:23228131). Interacts with host BID (PubMed:28053104). dInteracts with host BAX (PubMed:28053104).
Interacts with host BECN1. Interacts with host BID. Interacts with host BAX.
Miscellaneous
Expressed early and late in the infection cycle.
Similarity
Belongs to the Bcl-2 family.
Keywords
3D-structure   Apoptosis   Complete proteome   Host-virus interaction   Inhibition of host apoptosis by viral BCL2-like protein   Modulation of host cell apoptosis by virus   Reference proteome  
Feature
chain  Apoptosis regulator Bcl-2 homolog
Pfam
PF00452   Bcl-2
Interpro
IPR036834   Blc2-like_sf
IPR026298   Blc2_fam
IPR020717   Bcl2_BH1_motif_CS
IPR002475   Bcl2-like
IPR020726   Bcl2_BH2_motif_CS
SUPFAM
SSF56854   SSF56854
Gene 3D
PDB
5UA5     E-value=5.16993e-78,     Score=736

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
179
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.33141
Exp number, first 60 AAs:
0.03077
Total prob of N-in:
0.06201
outside
1  -  179
 
 

Population Genetic Test Statistics

Pi
0.028313
Theta
0.0409595
Tajima's D
-1.0270269
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62723.1
China_AnhuiXCGQ_2018 Protein
AYW34013.1
China_ASFV-SY18_2018 Protein
AKO62723.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95817.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10140.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10140.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10140.1
Poland_Pol17_03029_C201_2016-2017 Protein
AXZ96005.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96100.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10140.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10140.1
Uganda_R8_2015 Protein
AXB49270.1
Uganda_R7_2015 Protein
AXB49444.1
Uganda_R25_2015 Protein
AXB49616.1
Uganda_N10_2015 Protein
AXB49787.1
Uganda_R35_2015 Protein
AXB49960.1
Estonia_2014 Protein
SPS73464.1
Italy_26544_OG10_2010 Protein
AJZ77140.1
Italy_47_Ss_2008_2008 Protein
AOO54371.1
Portugal_OURT_88.3_1988 Protein
CAN10389.1
Spain_E75_1975 Protein
CBH29142.1
Russia_Georgia_2007 Protein
CBW46707.1
Kenya_Tk1_2005 Protein
AJL34055.1
Kenya_Bus_2006 Protein
AJL34220.1
Russia_Odintsovo_2014    
Portugal_L60_1960 Protein
AIY22232.1
Portugal_NHV_1968 Protein
AIY22391.1
Russia_Kashino_2013 Protein
CAN10140.1
Benin_1997 Protein
Protein
CAN10140.1
CAN10140.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10140.1
South_Africa_MGR_Mkuzi_1979 Protein
CAN10140.1
Malawi_Lil_1983 Protein
CAN10140.1
Kenya_1950 Protein
CAN10140.1
Namibia_Warthog_1980 Genetic Remain
CAN10140.1
South_Africa_Warmbaths_1987 Protein
CAN10140.1
Malawi_Tengani_1962 Protein
CAN10140.1
China_HLJ_2018 Protein
QBH90529.1
China_LN_2018 Protein
QBH90714.1
China_wbBS01_2018 Protein
QDL88072.1
Ukraine_Kyiv_2014 Protein
QED21597.1
Belgium_Etalle_wb_2018 Protein
QED90484.1
Lithuania_LT14_2014 Protein
QEY87847.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
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