Strain

Spain_BA71_1971 (Region: Spain, Badajoz; Strain: BA71; Date: 1971)

Gene

pA118R

Description

Annotated in NCBI, A118R

Location

KP055815.1(+):39251-39607

GenBank Accession

AKO62718.1

Full name

Uncharacterized protein A118R

Sequence

CDS

ATGCATTCTAATGCCTTTTTTAATCTCATTGCCTGTGTGCTTTTTCCCACACCATTGATTCCCTCGATGGTAATAAGTATTCCACGCATGATTAATAAATGGGTAAAAAGAGTTCAGTTTTTAACATTTCTTACAAATCTATTTTTATACAACATTGTACAACACTACATTAACCGCATACGATGTTATAGCTTCATTAAATATTTGCTTTTATATAATCTTTACCGACCTATATTTGGCAGATCACTGCAGATGGCCATAACTAAGATAAAAATTATTTCAGATGCTACTGCGGCAGTATTATTAAAATCATGTGCGGCAATGTATGACGTCTTAATAGATAAAAAATTTAAGTAA

Protein

MHSNAFFNLIACVLFPTPLIPSMVISIPRMINKWVKRVQFLTFLTNLFLYNIVQHYINRIRCYSFIKYLLLYNLYRPIFGRSLQMAITKIKIISDATAAVLLKSCAAMYDVLIDKKFK

Summary

Keywords

Complete proteome Membrane Reference proteome Transmembrane Transmembrane helix

Feature

chain Uncharacterized protein A118R

Uniprot

D4I5M4 A9JLM9 A0A0A1DXJ0 Q65139

Pubmed

18198370 25406173 26618713 11831707

EMBL

FN557520 CBH29137.1 AM712240 CAN10384.1 KM262844 KM262845 + More
KM102979 KP055815 KX354450 AIY22227.1 AIY22386.1 AKM05535.1 AKO62718.1 AOO54363.1 U18466

Proteomes

UP000101090 UP000108903 UP000110401 UP000117635 UP000142390 UP000241813 + More
UP000266411 UP000000624

ProteinModelPortal

D4I5M4 A9JLM9 A0A0A1DXJ0 Q65139

Ontologies

KEGG

vg:22220418

GO:0016021 C:integral component of membrane

Subcellular Location

From MSLVP

Multi-Pass Membrane

From Uniprot

Membrane

Topology

Length:

118

Number of predicted TMHs:

Exp number of AAs in TMHs:

42.66653

Exp number, first 60 AAs:

38.72632

Total prob of N-in:

0.54610

POSSIBLE N-term signal

sequence

outside

1 - 4

TMhelix

5 - 27

inside

28 - 39

TMhelix

40 - 57

outside

58 - 118

Population Genetic Test Statistics

0.084535

Theta

0.0940397

Tajima's D

-0.4958041

CLR

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62718.1
China_AnhuiXCGQ_2018	Protein	AYW34008.1
China_ASFV-SY18_2018	Protein	CBW46702.1
Poland_Pol16_20186_o7_2016-2017
Poland_Pol16_20538_o9_2016-2017
Poland_Pol16_20540_o10_2016-2017
Poland_Pol16_29413_o23_2016-2017
Poland_Pol17_03029_C201_2016-2017
Poland_Pol17_04461_C210_2016-2017
Poland_Pol17_05838_C220_2016-2017
Poland_ASFV_POL_Podlaskie_2015
Uganda_R8_2015
Uganda_R7_2015
Uganda_R25_2015
Uganda_N10_2015
Uganda_R35_2015
Estonia_2014	Protein	SPS73459.1
Italy_26544_OG10_2010	Protein	AKM05535.1
Italy_47_Ss_2008_2008	Protein	AOO54363.1
Portugal_OURT_88.3_1988	Protein Protein	CAN10384.1 CAN10384.1
Spain_E75_1975	Protein	CBH29137.1
Russia_Georgia_2007	Protein	CBW46702.1
Kenya_Tk1_2005
Kenya_Bus_2006
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22227.1
Portugal_NHV_1968	Protein	AIY22386.1
Russia_Kashino_2013
Benin_1997	Protein	CAN10384.1
South_Africa_KNP_Pretorisuskop_1996
South_Africa_MGR_Mkuzi_1979
Malawi_Lil_1983
Kenya_1950
Namibia_Warthog_1980
South_Africa_Warmbaths_1987	Protein	CAN10384.1
Malawi_Tengani_1962
China_HLJ_2018	Protein	QBH90524.1
China_LN_2018	Protein	QBH90709.1
China_wbBS01_2018	Protein	QDL88067.1
Ukraine_Kyiv_2014
Belgium_Etalle_wb_2018	Protein	QED90479.1
Lithuania_LT14_2014	Protein	QEY87842.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983	Protein	QGM12702.1