Strain
Italy_26544_OG10_2010
(Region: Sardinian,Italy; Strain: 26544/OG10; Date: 2010)
Gene
C62L
Description
Annotated in NCBI,
pC62L
Location
GenBank Accession
Full name
Uncharacterized protein C62L
Sequence
CDS
ATGAACTGGGGGTCTATATCGAGTGGCACGCCTGGCTTATTCGTAGAATCCATACGCAATACGCCCTCTGTGGTAAAAATTAATGTTATTTTTTTAAAGGTAATATCCAACACCGCTGTGAGCGTTTTTTGGCGAGATAGACGCATAAGGTTTGAAAGCGACTGGTTAAACTCGTACTTCCAAAAGTAA
Protein
MNWGSISSGTPGLFVESIRNTPSVVKINVIFLKVISNTAVSVFWRDRRIRFESDWLNSYFQK
Summary
Similarity
Belongs to the asfivirus C62L family.
Keywords
Complete proteome
Reference proteome
Feature
chain Uncharacterized protein C62L
EMBL
Proteomes
Ontologies
KEGG
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
62
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
7.89173
Exp number, first 60 AAs:
7.89173
Total prob of N-in:
0.20312
outside
1 - 62
Population Genetic Test Statistics
Pi
0.0368587
Theta
0.0419961
Tajima's D
-0.2626058
CLR
0
Interpretation
No evidence of Selection
Multiple alignment of Orthologues
Gene Tree
Orthologous in Strains
| Strain | Availability | Status | Gene |
|---|---|---|---|
| Spain_BA71_1971 |
Protein |
AKO62752.1 |
|
| China_AnhuiXCGQ_2018 |
Protein |
AYW34041.1 |
|
| China_ASFV-SY18_2018 |
Protein |
AKO62752.1 |
|
| Poland_Pol16_20186_o7_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_Pol16_20538_o9_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_Pol16_20540_o10_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_Pol16_29413_o23_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_Pol17_03029_C201_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_Pol17_04461_C210_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_Pol17_05838_C220_2016-2017 |
Protein |
CAN10170.1 |
|
| Poland_ASFV_POL_Podlaskie_2015 |
Protein |
CAN10170.1 |
|
| Uganda_R8_2015 | |||
| Uganda_R7_2015 | |||
| Uganda_R25_2015 | |||
| Uganda_N10_2015 | |||
| Uganda_R35_2015 | |||
| Estonia_2014 |
Protein |
SPS73493.1 |
|
| Italy_26544_OG10_2010 |
Protein |
AJZ77191.1 |
|
| Italy_47_Ss_2008_2008 |
Protein |
AOO54406.1 |
|
| Portugal_OURT_88.3_1988 |
Protein |
CAN10419.1 |
|
| Spain_E75_1975 |
Protein |
CBH29171.1 |
|
| Russia_Georgia_2007 |
Protein |
CBW46736.1 |
|
| Kenya_Tk1_2005 |
Protein |
AJL34084.1 |
|
| Kenya_Bus_2006 |
Protein |
AJL34249.1 |
|
| Russia_Odintsovo_2014 |
Protein |
CAN10170.1 |
|
| Portugal_L60_1960 |
Protein |
AIY22262.1 |
|
| Portugal_NHV_1968 |
Protein |
AIY22420.1 |
|
| Russia_Kashino_2013 |
Protein |
CAN10170.1 |
|
| Benin_1997 |
Protein Protein |
CAN10170.1 CAN10170.1 |
|
| South_Africa_KNP_Pretorisuskop_1996 |
Protein |
CAN10170.1 |
|
| South_Africa_MGR_Mkuzi_1979 |
Protein |
CAN10170.1 |
|
| Malawi_Lil_1983 |
Protein |
CAN10170.1 |
|
| Kenya_1950 | |||
| Namibia_Warthog_1980 |
Protein |
CAN10170.1 |
|
| South_Africa_Warmbaths_1987 |
Protein |
CAN10170.1 |
|
| Malawi_Tengani_1962 |
Protein |
CAN10170.1 |
|
| China_HLJ_2018 |
Protein |
QBH90558.1 |
|
| China_LN_2018 |
Protein |
QBH90743.1 |
|
| China_wbBS01_2018 |
Protein |
QDL88101.1 |
|
| Ukraine_Kyiv_2014 |
Protein |
CAN10170.1 |
|
| Belgium_Etalle_wb_2018 |
Protein |
QED90513.1 |
|
| Lithuania_LT14_2014 |
Protein |
QEY87876.1 |
|
| South_Africa_1985 |
Protein |
CAN10170.1 |
|
| South_Africa_2_2008 |
Protein |
CAN10170.1 |
|
| Zambia_LIV_1983 |
Protein |
CAN10170.1 |
