Strain

Russia_Kashino_2013 (Region: Russia; Strain: Kashino 04/13; Date: 2013)

Gene

I196L

Description

With frameshift mutation but translatable, I196L

Location

KJ747406.1(-):175159-175641

GenBank Accession

CBW46810.1

CDS

ATGTTGTTTAGGTATTTAGTATGGCTTTTTAGGTTTATTGAGGTTAAAAATGTAGTTAGCATTAGTTTACTTGTAATAGGTAGTAATTATTTAACGACAGCCATTTCTAATAATACTAGTACAACTATTTCACCCACAACAACAAGTAGTAATTATTTAATGACAGCCATTTCCAATAATACCAGTACAACTATTTCACCCACAACAACAAGTAGTAATTATTTAATGACAGCCATTCCTAATATTATTAGTGATAAAGAAGACGATATACATTTCAGCACAGATAAGACTGTATTTGATAGGTTATCCCCTATAACTTTATATCGAGCTATCAGGTCGACCCTAAATGACACTAGTACGAAAACAATGACCGATCATATTTTAACAAGACCTTATAGACCTACTACAGTGATATTCCACTCTGATACTCCCCAGCCAGTTAAAAATGCGACTCAAGGCAACATTGTAAAAAAAACTATATAG

Protein

MLFRYLVWLFRFIEVKNVVSISLLVIGSNYLTTAISNNTSTTISPTTTSSNYLMTAISNNTSTTISPTTTSSNYLMTAIPNIISDKEDDIHFSTDKTVFDRLSPITLYRAIRSTLNDTSTKTMTDHILTRPYRPTTVIFHSDTPQPVKNATQGNIVKKTI

Uniprot

E0WM94 A0A2X0RUH8

Pubmed

21470447

EMBL

FR682468 CBW46810.1 MG939583 MG939588 LS478113 AXZ95914.1 + More
AXZ96197.1 SPS73566.1

Proteomes

UP000141072

ProteinModelPortal

E0WM94 A0A2X0RUH8

PDB

4FUT E-value=2.51046, Score=68

Ontologies

Subcellular Location

From MSLVP

Single-Pass Membrane

Topology

Length:

160

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.27266

Exp number, first 60 AAs:

2.25572

Total prob of N-in:

0.08301

outside

1 - 160

Population Genetic Test Statistics

Pi

0.0594188

Theta

0.0763331

Tajima's D

-0.682353

CLR

0.471385

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62824.1
China_AnhuiXCGQ_2018	Protein	AYW34114.1
China_ASFV-SY18_2018	Protein	AKO62824.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95914.1
Poland_Pol16_20538_o9_2016-2017	Protein	CBW46810.1
Poland_Pol16_20540_o10_2016-2017	Protein	CBW46810.1
Poland_Pol16_29413_o23_2016-2017	Protein	CBW46810.1
Poland_Pol17_03029_C201_2016-2017	Protein	CBW46810.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96197.1
Poland_Pol17_05838_C220_2016-2017	Protein	CBW46810.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CBW46810.1
Uganda_R8_2015
Uganda_R7_2015
Uganda_R25_2015
Uganda_N10_2015
Uganda_R35_2015
Estonia_2014	Protein	SPS73566.1
Italy_26544_OG10_2010	Protein	AJZ77134.1
Italy_47_Ss_2008_2008	Protein	AOO54515.1
Portugal_OURT_88.3_1988	Protein	CAN10492.1
Spain_E75_1975	Protein	CBH29243.1
Russia_Georgia_2007	Protein Protein	CBW46810.1 CBW46810.1
Kenya_Tk1_2005
Kenya_Bus_2006
Russia_Odintsovo_2014	Protein	CBW46810.1
Portugal_L60_1960	Protein	AIY22334.1
Portugal_NHV_1968	Protein	AIY22492.1
Russia_Kashino_2013	Protein	CBW46810.1
Benin_1997	Protein	CAN10242.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CBW46810.1
South_Africa_MGR_Mkuzi_1979	Protein	CBW46810.1
Malawi_Lil_1983
Kenya_1950	Protein	CBW46810.1
Namibia_Warthog_1980	Protein	CBW46810.1
South_Africa_Warmbaths_1987	Protein	CBW46810.1
Malawi_Tengani_1962	Protein	CBW46810.1
China_HLJ_2018	Protein	QBH90632.1
China_LN_2018	Protein	QBH90817.1
China_wbBS01_2018	Protein	QDL88175.1
Ukraine_Kyiv_2014	Protein	QED21759.1
Belgium_Etalle_wb_2018	Protein	QED90586.1
Lithuania_LT14_2014	Protein	QEY87949.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983

Sequence