Strain
Russia_Georgia_2007
(Region: Russia; Strain: Georgia 2007/1; Date: 2007)
Gene
KP93L
Description
Annoated by sequence mapping,
KP93L
Location
GenBank Accession
Full name
Uncharacterized membrane protein KP93L
Sequence
CDS
ATGTTTTTTTTGGTATTTTTAAGCGCAACCATGGATTATTGGTCTACCAAAGTGAAGATCTATAGCTACGCCTTATTGATATTACTGTTAATAACATTAATATGCTATCTTATACATATCTTTTGTAAGCTTCGAATGATGAAAAATGCTGTTACAAACAACATGCCGCCGCCACCACCATACACGGTATCAAGTCGCTGTTCTCAATATTATATTGATTGA
Protein
MFFLVFLSATMDYWSTKVKIYSYALLILLLITLICYLIHIFCKLRMMKNAVTNNMPPPPPYTVSSRCSQYYID
Summary
Miscellaneous
Encoded wby inverted terminal repeats (ITR).
Similarity
Belongs to the asfivirus KP93L family.
Keywords
Complete proteome
Host membrane
Membrane
Transmembrane
Transmembrane helix
Feature
chain Uncharacterized membrane protein KP93L
Uniprot
Pubmed
Proteomes
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
73
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.71332
Exp number, first 60 AAs:
22.71332
Total prob of N-in:
0.02265
POSSIBLE N-term signal
sequence
outside
1 - 19
TMhelix
20 - 42
inside
43 - 73
Population Genetic Test Statistics
Pi
0.1495144
Theta
0.1957677
Tajima's D
-0.7062888
CLR
0.288127
Interpretation
No evidence of Selection
Multiple alignment of Orthologues
Gene Tree
Orthologous in Strains
| Strain | Availability | Status | Gene |
|---|---|---|---|
| Spain_BA71_1971 | |||
| China_AnhuiXCGQ_2018 |
Protein |
QEY87781.1 |
|
| China_ASFV-SY18_2018 | |||
| Poland_Pol16_20186_o7_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_Pol16_20538_o9_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_Pol16_20540_o10_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_Pol16_29413_o23_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_Pol17_03029_C201_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_Pol17_04461_C210_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_Pol17_05838_C220_2016-2017 |
Protein |
QEY87781.1 |
|
| Poland_ASFV_POL_Podlaskie_2015 |
Protein |
QEY87781.1 |
|
| Uganda_R8_2015 | |||
| Uganda_R7_2015 | |||
| Uganda_R25_2015 | |||
| Uganda_N10_2015 | |||
| Uganda_R35_2015 | |||
| Estonia_2014 | |||
| Italy_26544_OG10_2010 | |||
| Italy_47_Ss_2008_2008 | |||
| Portugal_OURT_88.3_1988 | |||
| Spain_E75_1975 | |||
| Russia_Georgia_2007 |
Protein |
QEY87781.1 |
|
| Kenya_Tk1_2005 | |||
| Kenya_Bus_2006 | |||
| Russia_Odintsovo_2014 |
Protein |
QEY87781.1 |
|
| Portugal_L60_1960 | |||
| Portugal_NHV_1968 | |||
| Russia_Kashino_2013 |
Protein |
QEY87781.1 |
|
| Benin_1997 | |||
| South_Africa_KNP_Pretorisuskop_1996 |
Protein |
QEY87781.1 |
|
| South_Africa_MGR_Mkuzi_1979 |
Protein |
QEY87781.1 |
|
| Malawi_Lil_1983 | |||
| Kenya_1950 | |||
| Namibia_Warthog_1980 | |||
| South_Africa_Warmbaths_1987 |
Protein |
QEY87781.1 |
|
| Malawi_Tengani_1962 | |||
| China_HLJ_2018 |
Protein |
QEY87781.1 |
|
| China_LN_2018 |
Protein |
QEY87781.1 |
|
| China_wbBS01_2018 |
Protein |
QEY87781.1 |
|
| Ukraine_Kyiv_2014 |
Protein |
QEY87781.1 |
|
| Belgium_Etalle_wb_2018 |
Protein |
QEY87781.1 |
|
| Lithuania_LT14_2014 |
Protein Protein |
QEY87781.1 QEY87781.1 |
|
| South_Africa_1985 | |||
| South_Africa_2_2008 | |||
| Zambia_LIV_1983 |
Protein |
QEY87781.1 |
