ASFVdb The African Swine Fever Virus Database
Strain
Spain_E75_1975 (Region: Spain;  Strain: E75;  Date: 1975)
Gene
BA71V-EP153R
Description
Annotated in NCBI,  non-essential
GenBank Accession
Full name
Lectin-like protein EP153R      
 

Sequence

CDS
ATGTATTTTAAGAAAAAATACATCGGTCTTATTGATAAGAACTGTGAAAAAAAAATATTAGATGATTCTAGTACAATAAAAATTTGTTACATATTAATTGGAATATTGATTGGAACTAATATGATAACTCTTATTTATAATTTCATATTCTGGGATAATTATATAAAATGTTACCGAAATAATGATAAAATGTTTTACTGTCCTAATGATTGGGTTGGATATAATAATATTTGTTACTATTTTAGTAATGGTAGTTTTTCTAAAAATTATACAGCTGCTAGTAATTTTTGTAGACAATTAAATGGTACACTTGCTAATAATGATACTAATTTATTAAATCTAACTAAAATATATAATAATCAATCTATGTATTGGGTTAACAATACGGTAATATTACGTGGTGATAATAAATATAGTCAAAAAGTTAACTATACAGATTTATTATTTATTTGTGGTAAATAA
Protein
MYFKKKYIGLIDKNCEKKILDDSSTIKICYILIGILIGTNMITLIYNFIFWDNYIKCYRNNDKMFYCPNDWVGYNNICYYFSNGSFSKNYTAASNFCRQLNGTLANNDTNLLNLTKIYNNQSMYWVNNTVILRGDNKYSQKVNYTDLLFICGK

Summary

Function
Participates to viral hemadsorption, which may help viral spread (PubMed:10639320). Reduces the transactivating activity of host TP53, thus inhibiting apoptosis (PubMed:15262504). Non-essential for virus growth in swine macrophage cell cultures (By similarity).
Participates to viral hemadsorption, which may help viral spread. Reduces the transactivating activity of host TP53, thus inhibiting apoptosis (By similarity). Non-essential for virus growth in swine macrophage cell cultures (By similarity).
Participates to viral hemadsorption, which may help viral spread. Reduces the transactivating activity of host TP53, thus inhibiting apoptosis (By similarity). Non-essential for virus growth in swine macrophage cell cultures (PubMed:10573162).
Similarity
Belongs to the asfivirus lectin-like protein family.
Keywords
Complete proteome   Glycoprotein   Host membrane   Host-virus interaction   Lectin   Membrane   Modulation of host cell apoptosis by virus   Reference proteome   Signal-anchor   Transmembrane   Transmembrane helix   Late protein  
Feature
chain  Lectin-like protein EP153R
EMBL
AF481876    AAM90853.1    AM712239    CAN10157.1    FN557520    CBH29158.1    + More
AF017030    AF017031    AF017032    AY463913    AY463915    AY463916    DQ026264    DQ026266    DQ026267    DQ026268    DQ026269    DQ026270    KM262844    KM609334    KM609337    KM609350    KM609351    KM609352    KM609355    KM102979    KP055815    KX354450    AAC28417.1    AAS45763.1    AAY44916.1    AAY44920.1    AAY44922.1    AAY44925.1    AAY44926.1    AAY44928.1    AIY22248.1    AJB28357.1    AJB28363.1    AJB28385.1    AJB28387.1    AJB28389.1    AJB28393.1    AJZ77151.1    AKO62739.1    AOO54389.1    U18466    AF017034    AAC28419.1    DQ026265    AAY44918.1    AF017033    AAC28418.1    KM609361    AJB28404.1    AF017037    AAC28422.1    KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    AJL34236.1    AXB49286.1    AXB49460.1    AXB49632.1    AXB49803.1    AXB49976.1    KM609340    KM609343    KM609344    KM609345    AJB28367.1    AJB28372.1    AJB28374.1    AJB28376.1    KM111294    AJL34071.1    AF017027    AAC28412.1    AY261363    AF017036    AF050111    KM609346    KM609347    AJB28377.1    AJB28379.1    AF017035    KM609354    AAC28420.1    AJB28391.1    AY261361    KM609348    AJB28381.1    KM609335    AJB28359.1    AF017029    AAC28414.1    KM609336    AJB28361.1    KM609359    AJB28400.1    KM609349    AJB28383.1    AF017038    AAC28423.1    AY261366    AF017028    AAC28413.1    AF017039    KM609339    KM609341    KM609356    KM609357    AAC28424.1    AJB28365.1    AJB28368.1    AJB28395.1    AJB28397.1    AY261360    FR682468    CBW46723.1    KM609342    KM609360    KM609362    KM609363    KU752730    KU752731    KU752732    KU752733    KU752734    KU752735    KU752736    KU752737    KU752738    KU752739    KU752740    KU752741    KU752742    KU752743    KU752744    KU752745    KU752746    KU752747    KU752748    KU752749    KU752750    KU752751    KU752752    KU752753    KU752754    KU752755    KU752756    KU752757    KU752758    KU752759    KU752760    KU752761    KU752762    KU752763    KU752764    KU752765    KU752766    KU752767    KU752768    KU752769    KU752770    KU752771    KU752772    KU752773    KU752774    KU752775    KU752776    KU752777    KU752778    KU752779    KU752780    KU752781    KU752782    KU752783    KU752784    KU752785    KU752786    KU752787    KU752788    KU752789    KU752790    KU752791    KU752792    KU752793    KU752794    KU752795    KU752796    MG939583    MG939587    MG939588    LS478113    AJB28370.1    AJB28402.1    AJB28406.1    AJB28408.1    ANC98852.1    ANC98853.1    ANC98854.1    ANC98855.1    ANC98856.1    ANC98857.1    ANC98858.1    ANC98859.1    ANC98860.1    ANC98861.1    ANC98862.1    ANC98863.1    ANC98864.1    ANC98865.1    ANC98866.1    ANC98867.1    ANC98868.1    ANC98869.1    ANC98870.1    ANC98871.1    ANC98872.1    ANC98873.1    ANC98874.1    ANC98875.1    ANC98876.1    ANC98877.1    ANC98878.1    ANC98879.1    ANC98880.1    ANC98881.1    ANC98882.1    ANC98883.1    ANC98884.1    ANC98885.1    ANC98886.1    ANC98887.1    ANC98888.1    ANC98889.1    ANC98890.1    ANC98891.1    ANC98892.1    ANC98893.1    ANC98894.1    ANC98895.1    ANC98896.1    ANC98897.1    ANC98898.1    ANC98899.1    ANC98900.1    ANC98901.1    ANC98902.1    ANC98903.1    ANC98904.1    ANC98905.1    ANC98906.1    ANC98907.1    ANC98908.1    ANC98909.1    ANC98910.1    ANC98911.1    ANC98912.1    ANC98913.1    ANC98914.1    ANC98915.1    ANC98916.1    ANC98917.1    ANC98918.1    AXZ95832.1    AXZ96020.1    AXZ96115.1    SPS73480.1   
Pfam
PF05473   UL45
Interpro
IPR016187   CTDL_fold
IPR008646   Herpes_UL45-like
IPR016186   C-type_lectin-like/link_sf
SUPFAM
SSF56436   SSF56436
Gene 3D
PDB
5MGT     E-value=0.938138,     Score=69

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane  

Topology

Length:
153
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.47056
Exp number, first 60 AAs:
22.77683
Total prob of N-in:
0.24535
POSSIBLE N-term signal
sequence
outside
1  -  27
TMhelix
28  -  50
inside
51  -  153
 
 

Population Genetic Test Statistics

Pi
0.136692
Theta
0.1687574
Tajima's D
-0.7272415
CLR
0.702987
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62739.1
China_AnhuiXCGQ_2018    
China_ASFV-SY18_2018    
Poland_Pol16_20186_o7_2016-2017    
Poland_Pol16_20538_o9_2016-2017    
Poland_Pol16_20540_o10_2016-2017    
Poland_Pol16_29413_o23_2016-2017    
Poland_Pol17_03029_C201_2016-2017    
Poland_Pol17_04461_C210_2016-2017    
Poland_Pol17_05838_C220_2016-2017    
Poland_ASFV_POL_Podlaskie_2015    
Uganda_R8_2015    
Uganda_R7_2015    
Uganda_R25_2015    
Uganda_N10_2015    
Uganda_R35_2015    
Estonia_2014    
Italy_26544_OG10_2010 Protein
AJZ77151.1
Italy_47_Ss_2008_2008 Protein
AOO54389.1
Portugal_OURT_88.3_1988    
Spain_E75_1975 Protein
CBH29158.1
Russia_Georgia_2007    
Kenya_Tk1_2005 Protein
AJL34071.1
Kenya_Bus_2006    
Russia_Odintsovo_2014    
Portugal_L60_1960 Protein
AIY22248.1
Portugal_NHV_1968    
Russia_Kashino_2013    
Benin_1997 Protein
CAN10157.1
South_Africa_KNP_Pretorisuskop_1996    
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983    
Kenya_1950    
Namibia_Warthog_1980    
South_Africa_Warmbaths_1987    
Malawi_Tengani_1962    
China_HLJ_2018    
China_LN_2018    
China_wbBS01_2018    
Ukraine_Kyiv_2014    
Belgium_Etalle_wb_2018    
Lithuania_LT14_2014    
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

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