Strain

South_Africa_Warmbaths_1987 (Region: South Africa, Warmbaths; Strain: Warmbaths; Date: 1987)

Gene

pD79L

Description

With frameshift mutation but translatable, putative product contains S100_CABP motif (EF-hand-like signature)

Location

AY261365.1(-):138867-139106

GenBank Accession

CAN10203.1

Full name

Uncharacterized protein D79L

Sequence

CDS

ATGAATAAGACGATTGAATATCAAAAAGAGTTTTTAAAAGAAAATAATCAATTGCTTAGTATCCCGATAAAAAAAAATATATTAAAAGAAATCTTACAAAACGATGAACAAGATACCATTATTACGAACTGTATCACAAAAGAAGTTAGTATTAATCTGGATTTGATTAAAAATCCAAAAGTGCTGTATAGTATTTACATCATGGTCGTTGAGTACTTAAAATCAATGAATATTGCTTAA

Protein

MNKTIEYQKEFLKENNQLLSIPIKKNILKEILQNDEQDTIITNCITKEVSINLDLIKNPKVLYSIYIMVVEYLKSMNIA

Summary

Similarity

Belongs to the asfivirus D79L family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein D79L

Uniprot

A9JL74 D4I5U1 A9JM08 E0WM54 A0A0A1E158 Q89675 + More
P0CAK5 P0CAK4 A0A0C5AZF9 A0A2Z5DGJ0 P0CAK3 Q65219

Pubmed

18198370 21470447 25406173 26618713 8262374 11831707 + More
25645905 8021596

EMBL

AM712239 CAN10203.1 FN557520 CBH29204.1 AM712240 CAN10453.1 + More
FR682468 CBW46770.1 KM262844 KM262845 KM102979 KP055815 KX354450 MG939583 MG939588 LS478113 AIY22295.1 AIY22453.1 AJZ77183.1 AKO62785.1 AOO54461.1 AXZ95878.1 AXZ96161.1 SPS73527.1 L10061 U18466 AY261366 AY261363 KM111294 KM111295 AJL34117.1 AJL34282.1 MH025916 MH025917 MH025918 MH025919 MH025920 AXB49332.1 AXB49506.1 AXB49678.1 AXB49849.1 AXB50022.1 AY261360 X71982 AY261361

Proteomes

UP000130745 UP000101090 UP000108903 UP000141072 UP000110401 UP000117635 + More
UP000142390 UP000241813 UP000266411 UP000000624 UP000000858 UP000000859 UP000101566 UP000105860 UP000000861 UP000000860

ProteinModelPortal

A9JL74 D4I5U1 A9JM08 E0WM54 A0A0A1E158 Q89675 + More
P0CAK5 P0CAK4 A0A0C5AZF9 A0A2Z5DGJ0 P0CAK3 Q65219

Ontologies

KEGG

vg:22220333

Subcellular Location

From MSLVP

Single-Pass Membrane

Topology

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

0.18216

Exp number, first 60 AAs:

0.03972

Total prob of N-in:

0.73397

inside

1 - 79

Population Genetic Test Statistics

0.0327411

Theta

0.0479315

Tajima's D

-0.9735017

CLR

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62785.1
China_AnhuiXCGQ_2018	Protein	AYW34075.1
China_ASFV-SY18_2018	Protein	AKO62785.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95878.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10203.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10203.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10203.1
Poland_Pol17_03029_C201_2016-2017	Protein	CAN10203.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96161.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10203.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10203.1
Uganda_R8_2015	Protein	AXB49332.1
Uganda_R7_2015	Protein	AXB49506.1
Uganda_R25_2015	Protein	AXB49678.1
Uganda_N10_2015	Protein	AXB49849.1
Uganda_R35_2015	Protein	AXB50022.1
Estonia_2014	Protein	SPS73527.1
Italy_26544_OG10_2010	Protein	AJZ77183.1
Italy_47_Ss_2008_2008	Protein	AOO54461.1
Portugal_OURT_88.3_1988	Protein	CAN10453.1
Spain_E75_1975	Protein	CBH29204.1
Russia_Georgia_2007	Protein	CBW46770.1
Kenya_Tk1_2005	Protein	AJL34117.1
Kenya_Bus_2006	Protein	AJL34282.1
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22295.1
Portugal_NHV_1968	Protein	AIY22453.1
Russia_Kashino_2013	Protein	CAN10203.1
Benin_1997	Protein Protein	CAN10203.1 CAN10203.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10203.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10203.1
Malawi_Lil_1983	Protein	CAN10203.1
Kenya_1950	Protein	CAN10203.1
Namibia_Warthog_1980	Protein	CAN10203.1
South_Africa_Warmbaths_1987	Protein	CAN10203.1
Malawi_Tengani_1962	Protein	CAN10203.1
China_HLJ_2018	Protein	QBH90592.1
China_LN_2018	Protein	QBH90777.1
China_wbBS01_2018	Protein	QDL88135.1
Ukraine_Kyiv_2014	Protein	QED21704.1
Belgium_Etalle_wb_2018	Protein	QED90547.1
Lithuania_LT14_2014	Protein	QEY87910.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983