Strain

South_Africa_MGR_Mkuzi_1979 (Region: South Africa, Mkuzi Game Reserve; Strain: Mkuzi 1979; Date: 1979)

Gene

pX69R

Description

With frameshift mutation but translatable, pX69R

Location

AY261362.1(+):20955-21164

GenBank Accession

QGM12803.1

Full name

Uncharacterized membrane protein X69R

CDS

ATGCTATTATACATAGTGATCATAGTGGCTTGTATCATTTCTAAACTAGTTCCAAATGAATATTGGGCAATACATCTATTTTTCATCATTATGATTTTTATGGTATATATGTATGAAAAGTTAGATATACATCAAAAATATCAGTTCTGGAATTATACGATGTCAGGCTTATCTGGACATAACGTACAGATAACATGTAAGTGTTACTAA

Protein

MLLYIVIIVACIISKLVPNEYWAIHLFFIIMIFMVYMYEKLDIHQKYQFWNYTMSGLSGHNVQITCKCY

Similarity

Belongs to the asfivirus X69R family.

Keywords

Complete proteome Glycoprotein Host membrane Membrane Transmembrane Transmembrane helix Reference proteome

Feature

chain Uncharacterized membrane protein X69R

Uniprot

P0CAJ4 P0CAJ2 P0CAJ3 A9JKS9 D4I5J9 A9JLK0 + More
A0A0A1E0G8 Q65134 E0WMF0 A0A2X0TKC7 A0A3Q9CZC7 P0CAJ1 A0A0C5AW83 A0A0C5BCI8 A0A2Z5DFP1

Pubmed

18198370 25406173 2325203 11831707 21470447 30547827 + More
25645905

EMBL

AY261366 AY261361 AY261363 AM712239 CAN10111.1 FN557520 + More
CBH29112.1 AM712240 CAN10367.1 KM262844 KM262845 KM102979 KX354450 AIY22203.1 AIY22369.1 AJZ77188.1 AOO54326.1 U18466 U81365 FR682468 CBW46678.1 LS478113 SPS73434.1 MH910495 AZP54110.1 AY261360 KM111294 AJL34029.1 KM111295 MH025916 MH025917 MH025918 MH025920 AJL34193.1 AXB49243.1 AXB49417.1 AXB49589.1 AXB49933.1 MH025919 AXB49762.1

Proteomes

UP000000858 UP000000860 UP000000859 UP000130745 UP000101090 UP000108903 + More
UP000110401 UP000117635 UP000142390 UP000266411 UP000000624 UP000141072 UP000000861 UP000105860 UP000101566

ProteinModelPortal

P0CAJ4 P0CAJ2 P0CAJ3 A9JKS9 D4I5J9 A9JLK0 + More
A0A0A1E0G8 Q65134 E0WMF0 A0A2X0TKC7 A0A3Q9CZC7 P0CAJ1 A0A0C5AW83 A0A0C5BCI8 A0A2Z5DFP1

PDB

4DLQ E-value=4.68603, Score=62

Ontologies

KEGG

vg:22220403

GO

GO:0016021 C:integral component of membrane
GO:0033644 C:host cell membrane

Subcellular Location

From MSLVP

Single-Pass Membrane

From Uniprot

Host membrane

Topology

Length:

69

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.50891

Exp number, first 60 AAs:

22.49056

Total prob of N-in:

0.84905

POSSIBLE N-term signal

sequence

inside

1 - 20

TMhelix

21 - 38

outside

39 - 69

Population Genetic Test Statistics

Pi

0.0962365

Theta

0.1230489

Tajima's D

-0.7205327

CLR

0.572315

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971
China_AnhuiXCGQ_2018	Protein	AYW33987.1
China_ASFV-SY18_2018
Poland_Pol16_20186_o7_2016-2017
Poland_Pol16_20538_o9_2016-2017
Poland_Pol16_20540_o10_2016-2017
Poland_Pol16_29413_o23_2016-2017
Poland_Pol17_03029_C201_2016-2017
Poland_Pol17_04461_C210_2016-2017
Poland_Pol17_05838_C220_2016-2017
Poland_ASFV_POL_Podlaskie_2015
Uganda_R8_2015
Uganda_R7_2015
Uganda_R25_2015
Uganda_N10_2015
Uganda_R35_2015
Estonia_2014	Protein	SPS73434.1
Italy_26544_OG10_2010	Protein	AJZ77188.1
Italy_47_Ss_2008_2008	Protein	AOO54326.1
Portugal_OURT_88.3_1988	Protein	CAN10367.1
Spain_E75_1975	Protein	CBH29112.1
Russia_Georgia_2007	Protein	CBW46678.1
Kenya_Tk1_2005
Kenya_Bus_2006
Russia_Odintsovo_2014
Portugal_L60_1960	Protein	AIY22203.1
Portugal_NHV_1968	Protein	AIY22369.1
Russia_Kashino_2013
Benin_1997	Protein	CAN10111.1
South_Africa_KNP_Pretorisuskop_1996	Protein	QGM12803.1
South_Africa_MGR_Mkuzi_1979	Protein	QGM12803.1
Malawi_Lil_1983	Protein	QGM12803.1
Kenya_1950
Namibia_Warthog_1980	Protein	QGM12803.1
South_Africa_Warmbaths_1987	Protein	QGM12803.1
Malawi_Tengani_1962	Protein	QGM12803.1
China_HLJ_2018	Protein	QBH90500.1
China_LN_2018	Protein	QBH90685.1
China_wbBS01_2018	Protein	QDL88043.1
Ukraine_Kyiv_2014	Protein	QED21564.1
Belgium_Etalle_wb_2018	Protein	QED90454.1
Lithuania_LT14_2014	Protein	QEY87817.1
South_Africa_1985	Protein	QGM12886.1
South_Africa_2_2008	Protein Protein	QGM12803.1 QGM12803.1
Zambia_LIV_1983	Protein Protein	QGM12803.1 QGM12680.1

Sequence