Strain

South_Africa_MGR_Mkuzi_1979 (Region: South Africa, Mkuzi Game Reserve; Strain: Mkuzi 1979; Date: 1979)

Gene

pC717R

Description

With frameshift mutation but translatable, VOCs Family: Unknown (BA71V-C717R)

Location

AY261362.1(+):83890-86040

GenBank Accession

CAN10164.1

Full name

Uncharacterized protein C717R

CDS

ATGACAAAATTAGCCCAATGGATGTTTGAGCAGTATGTCAAAGATTTAAACCTAAAAAATCGAGGGTCCCCCTCGTTCCGCAAATGGCTCACATTGCAACCCTCACTGCTGCGCTATTCGGGTGTGATGCGTGCTAACGCCTTTGACATCCTAAAATATGGCTATCCTATGCAGCAGTCAGGTTATACGGTTGCTACGCTTGAAATCCACTTTAAAAATATTAGGTCTTCCTTTGCCAACATTTACTGGAACCGTGATAGCGAGGAGCCTGAGTACGTCTGCTGTTGTGCCACCTATCAATCGCACGATGGCGAATACCGGTATCGATTTGTTTGGTACCAACCCTTCATAGAGGCTTATAATGCCATAGAGGCGGCCCTGGATCCCCTGGAAACCATTATCCTGAACCTCATTGCGGCACGAGATCTAGATTTCGTTGTTCACATATTTCCTTATAATAAGGGCCATGAAGACTATTTGGCCTCCACGCAACTTATTCTCAAAATCTTTATTGCGACGCTTTTAATGGACATTTTAAGAATTAAAGACAACACGTTGGACGTTCACTTAAATTCCGACTATATTATTGTGATGGAGCGGCTTTGGCCTCACATAAAGGATGCCATAGAACACTTTTTTGAAGCCCATAAGGACTTACTAGGGTACTTAATTGCCTTTCGCAATGGGGGGAACTTTGCAGGAAGTCTTAGACCCTCCTGTGGGCAAAAGATTGTTCCCCTAACGATTCGAGAGGTCCTACAAATGAATGATATTAATTTAGCCGTATGGCGGGAGGTGTTTATTATGCAGGAATGTTCCGACTTAGTCATCAATGGGATAGCGCCCTGTTTCCCCATTTTTAACACGTGGACGTATTTGCAAGGCATTAACCAGATTTTTTTTGAAAACACGTCTTTGCAGGAAAAATTTAAAAAAGATTTTATTGCCCGAGAGCTTTCCAAAGAAATTATCAAGGGCCAAAAAACGTTGAATGACAAGGAGTTTAAAAAGTTAAGCCTACATCAAATTCAGTATATGGAATCCTTTCTACTTATGTCGGATGTTGCCATTATGATTACCACAGAGTATGTTGGCTATACCCTTCAATCCCTGCCGGGTATTATTTCGCGATCCAGCTATTTATCCCCCATCGTGAAAAACATTTTGATGGACGAAGACTCTTTTATGTCCCTACTATTTGACCTATGCTATGGCGCCTACGTGTTGCATAAAAAAGAAAATGTGATTCACGCGGATTTGCACCTGAACAATATGACCTACTACCATTTCAACCCAACCAGTTTTACAGATCGCAACAAACCAGGAAAATACACCTTAAAGGTCAAGAATCCTGTGATTGCCTTTATAACCGGGCCCAAAGTCGAAACCGAAACGTACGTGTTCAAGCACATAGATGGGTTCGGCTGCATCATTGACTTTAGCAGAGCCATTATGGGGCCTAACCATGCAATTAAGCTTGAGCGGCAGTACGGCCTCGCTTTTGTAAATACCTTTTACCGCAATCAAAGTGAGCATATTTTAAAGGTATTACGGTACTATTTCCCTGAAATGCTAACCAATCGCGAAAACGAAATACAGGGGGTGATTTTATCAAACTTTAATTTCTTTTTCAATAGCATTACTGCCATTGATTTTTACGCCATTGCTAGAAACCTACGTAGTATGCTTTCTTTGGACTATTTACACACCTCTGAGGTGAAACGAAACGTAGAGATTTCGCAAACATTTTTGGATACATGTCAATTTTTGGAGGAAAAGGCCGTGGAATTTTTGTTTAAAAATCTTCATACTGTCTTATCTGGCAAGCCGGTCGAAAAAACGGCCGGGGATGTGCTTTTACCCATCGTATTTAAAAAATTTTTATACCCAAATATTCCTAAAAATATATTACGGTCTTTTACCGTAATAGATGTATACAATTATAATAATATAAAGCGTTATTCCGGGAAAGCTATACAAACGTTTCCACCCTGGGCTCAAACCAAAGAAATCTTGACGCACGCCGAGGGTCGTACATTTGAAGATATTTTTCCTAGAGGAGAATTAGTTTTTAAAAAGGCTTACGCAGAAAACAACCATTGGACAAAATTTTACAGCGTATTCGCGAGCAGCTTGCTAATGAAAATTTGT

Protein

MTKLAQWMFEQYVKDLNLKNRGSPSFRKWLTLQPSLLRYSGVMRANAFDILKYGYPMQQSGYTVATLEIHFKNIRSSFANIYWNRDSEEPEYVCCCATYQSHDGEYRYRFVWYQPFIEAYNAIEAALDPLETIILNLIAARDLDFVVHIFPYNKGHEDYLASTQLILKIFIATLLMDILRIKDNTLDVHLNSDYIIVMERLWPHIKDAIEHFFEAHKDLLGYLIAFRNGGNFAGSLRPSCGQKIVPLTIREVLQMNDINLAVWREVFIMQECSDLVINGIAPCFPIFNTWTYLQGINQIFFENTSLQEKFKKDFIARELSKEIIKGQKTLNDKEFKKLSLHQIQYMESFLLMSDVAIMITTEYVGYTLQSLPGIISRSSYLSPIVKNILMDEDSFMSLLFDLCYGAYVLHKKENVIHADLHLNNMTYYHFNPTSFTDRNKPGKYTLKVKNPVIAFITGPKVETETYVFKHIDGFGCIIDFSRAIMGPNHAIKLERQYGLAFVNTFYRNQSEHILKVLRYYFPEMLTNRENEIQGVILSNFNFFFNSITAIDFYAIARNLRSMLSLDYLHTSEVKRNVEISQTFLDTCQFLEEKAVEFLFKNLHTVLSGKPVEKTAGDVLLPIVFKKFLYPNIPKNILRSFTVIDVYNYNNIKRYSGKAIQTFPPWAQTKEILTHAEGRTFEDIFPRGELVFKKAYAENNHWTKFYSVFASSLLMKIC

Similarity

Belongs to the asfivirus C717R family.

Keywords

Complete proteome Reference proteome

Feature

chain Uncharacterized protein C717R

Uniprot

P0CAJ8 P0CAJ7 A0A1C6ZXX2 A9JL14 D4I5Q2 A9JLT7 + More
E0WMK2 A0A0A1E0Q2 Q65156 P0CAJ6 A0A2Z5DFS3 A0A2Z5DER7 A0A0C5BCN6 P0CAJ5 A0A0C5BC77

Pubmed

18198370 21470447 25406173 26618713 11831707 25645905 + More

EMBL

AY261366 AY261363 KM102979 KX354450 AJZ77052.1 AOO54397.1 + More
AM712239 CAN10164.1 FN557520 CBH29165.1 AM712240 CAN10412.1 FR682468 CBW46730.1 KM262844 KM262845 KP055815 MG939583 MG939587 MG939588 LS478113 AIY22256.1 AIY22414.1 AKO62746.1 AXZ95839.1 AXZ96027.1 AXZ96122.1 SPS73487.1 U18466 AY261361 MH025919 AXB49810.1 MH025916 MH025917 MH025918 MH025920 AXB49293.1 AXB49467.1 AXB49639.1 AXB49983.1 KM111295 AJL34243.1 AY261360 KM111294 AJL34078.1

Proteomes

UP000000858 UP000000859 UP000117635 UP000266411 UP000130745 UP000101090 + More
UP000108903 UP000141072 UP000110401 UP000142390 UP000241813 UP000000624 UP000000860 UP000101566 UP000000861 UP000105860

Interpro

IPR011009 Kinase-like_dom_sf

SUPFAM

SSF56112 SSF56112

ProteinModelPortal

P0CAJ8 P0CAJ7 A0A1C6ZXX2 A9JL14 D4I5Q2 A9JLT7 + More
E0WMK2 A0A0A1E0Q2 Q65156 P0CAJ6 A0A2Z5DFS3 A0A2Z5DER7 A0A0C5BCN6 P0CAJ5 A0A0C5BC77

PDB

2DDH E-value=3.6274, Score=72

Ontologies

KEGG

vg:22220294

Subcellular Location

From MSLVP

Single-Pass Membrane

Topology

Length:

717

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.933590000000001

Exp number, first 60 AAs:

0.00222

Total prob of N-in:

0.00983

outside

1 - 717

Population Genetic Test Statistics

Pi

0.0261521

Theta

0.0341329

Tajima's D

-0.81088

CLR

0

Interpretation

No evidence of Selection

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62746.1
China_AnhuiXCGQ_2018	Protein	CAN10164.1
China_ASFV-SY18_2018	Protein	AKO62746.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95839.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10164.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10164.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10164.1
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ96027.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96122.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10164.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10164.1
Uganda_R8_2015	Protein	AXB49293.1
Uganda_R7_2015	Protein	AXB49467.1
Uganda_R25_2015	Protein	AXB49639.1
Uganda_N10_2015	Protein	AXB49810.1
Uganda_R35_2015	Protein	AXB49983.1
Estonia_2014	Protein	SPS73487.1
Italy_26544_OG10_2010	Protein	AJZ77052.1
Italy_47_Ss_2008_2008	Protein	AOO54397.1
Portugal_OURT_88.3_1988	Protein	CAN10412.1
Spain_E75_1975	Protein	CBH29165.1
Russia_Georgia_2007	Protein	CBW46730.1
Kenya_Tk1_2005	Protein	AJL34078.1
Kenya_Bus_2006	Protein	AJL34243.1
Russia_Odintsovo_2014	Protein	CAN10164.1
Portugal_L60_1960	Protein	AIY22256.1
Portugal_NHV_1968	Protein	AIY22414.1
Russia_Kashino_2013	Protein	CAN10164.1
Benin_1997	Protein Protein	CAN10164.1 CAN10164.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10164.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10164.1
Malawi_Lil_1983	Protein	CAN10164.1
Kenya_1950	Protein	CAN10164.1
Namibia_Warthog_1980	Protein	CAN10164.1
South_Africa_Warmbaths_1987	Protein	CAN10164.1
Malawi_Tengani_1962	Protein	CAN10164.1
China_HLJ_2018	Protein	QBH90552.1
China_LN_2018	Protein	QBH90737.1
China_wbBS01_2018	Protein	QDL88095.1
Ukraine_Kyiv_2014	Protein	QED21634.1
Belgium_Etalle_wb_2018	Protein	QED90507.1
Lithuania_LT14_2014	Protein	QEY87870.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983

Sequence