Strain

Kenya_1950 (Region: Kenya ; Strain: Kenya 1950; Date: 1950)

Gene

pB169L

Description

With frameshift mutation but translatable, putative transmembrane protein

Location

AY261360.1(-):101346-101840

GenBank Accession

CAN10176.1

Full name

Transmembrane protein B169L

Sequence

CDS

ATGAATGTAGATTTTATTGCGGGTATCAACAATTTAGGAGAAAAAATTTATACATGCGAGCCGTTCAAAACATCCTTTCAAAATCCTTTCATTGTAGCCTTAATCATTACAGCAGTGGTACTAGTTGTATTTTTTGCCATTTGTAATCCGCCGGTGGATAAAAAACGAAAAACGAAGACGGCTATTTACATATATATATGCATTGTAGCACTATTATTTTTGCATTATTATGTTTTAAATCACCAGTTAAACGACATTTATAATAAATCAAACATGGATGTCATTGTTTCTTCTATCCACGACAAATATAAAGGAGGAGATGAAATCATTCCTCCTGTTTCTCCCCCATCTGTTCCTGATGAACTAGAAGAAGATCGACCTAAAATGATACCCGCCGGTTCAAAACCGGCCGATTTTAAACCGGCCGAACCGGCCGTTTCAAAGCCTCTTATACCCTTACAAGAAGTAATTATGCCTTCTCAATATAATAATTAA

Protein

MNVDFIAGINNLGEKIYTCEPFKTSFQNPFIVALIITAVVLVVFFAICNPPVDKKRKTKTAIYIYICIVALLFLHYYVLNHQLNDIYNKSNMDVIVSSIHDKYKGGDEIIPPVSPPSVPDELEEDRPKMIPAGSKPADFKPAEPAVSKPLIPLQEVIMPSQYNN

Summary

Similarity

Belongs to the asfivirus B169L family.

Keywords

Complete proteome Glycoprotein Host membrane Membrane Transmembrane Transmembrane helix Reference proteome

Feature

chain Transmembrane protein B169L

Uniprot

P0CA71 P0CA72 E0WML5 A0A2X0TC91 A0A0C5B028 D4I5R5 + More
A0A0A1E0N0 Q65166 A9JL32 A9JLV7 A0A0A1E3L1 P0CA70 A0A0C5AZG6 Q8V9T3

Pubmed

21470447 25645905 25406173 26618713 11831707 18198370 + More

EMBL

AY261363 AY261366 FR682468 CBW46743.1 MG939583 MG939587 + More
MG939588 LS478113 AXZ95851.1 AXZ96039.1 AXZ96134.1 SPS73500.1 KM111295 MH025916 MH025917 MH025918 MH025919 MH025920 AJL34255.1 AXB49305.1 AXB49479.1 AXB49651.1 AXB49822.1 AXB49995.1 FN557520 CBH29178.1 KM262844 KM102979 KP055815 KX354450 AIY22268.1 AJZ77147.1 AKO62758.1 AOO54416.1 U18466 AM712239 CAN10176.1 AM712240 CAN10426.1 KM262845 AIY22426.1 AY261360 KM111294 AJL34090.1 L00966 AY261361

Proteomes

UP000000859 UP000000858 UP000141072 UP000101566 UP000101090 UP000117635 + More
UP000142390 UP000241813 UP000266411 UP000000624 UP000130745 UP000108903 UP000110401 UP000000861 UP000105860 UP000000860

ProteinModelPortal

P0CA71 P0CA72 E0WML5 A0A2X0TC91 A0A0C5B028 D4I5R5 + More
A0A0A1E0N0 Q65166 A9JL32 A9JLV7 A0A0A1E3L1 P0CA70 A0A0C5AZG6 Q8V9T3

Ontologies

KEGG

vg:22220306

GO:0033644 C:host cell membrane
GO:0016021 C:integral component of membrane

Subcellular Location

From MSLVP

Multi-Pass Membrane

From Uniprot

Host membrane

Topology

Length:

164

Number of predicted TMHs:

Exp number of AAs in TMHs:

40.33302

Exp number, first 60 AAs:

21.14062

Total prob of N-in:

0.14352

POSSIBLE N-term signal

sequence

outside

1 - 25

TMhelix

26 - 48

inside

49 - 60

TMhelix

61 - 79

outside

80 - 164

Population Genetic Test Statistics

0.0300618

Theta

0.0455105

Tajima's D

-0.7486376

CLR

Interpretation

No evidence of Selection

Genomic alignment in the CDS region

Multiple alignment of Orthologues

Gene Tree

Orthologous in Strains

Strain	Status	Gene
Spain_BA71_1971	Protein	AKO62758.1
China_AnhuiXCGQ_2018	Protein	AYW34048.1
China_ASFV-SY18_2018	Protein	AKO62758.1
Poland_Pol16_20186_o7_2016-2017	Protein	AXZ95851.1
Poland_Pol16_20538_o9_2016-2017	Protein	CAN10176.1
Poland_Pol16_20540_o10_2016-2017	Protein	CAN10176.1
Poland_Pol16_29413_o23_2016-2017	Protein	CAN10176.1
Poland_Pol17_03029_C201_2016-2017	Protein	AXZ96039.1
Poland_Pol17_04461_C210_2016-2017	Protein	AXZ96134.1
Poland_Pol17_05838_C220_2016-2017	Protein	CAN10176.1
Poland_ASFV_POL_Podlaskie_2015	Protein	CAN10176.1
Uganda_R8_2015	Protein	AXB49305.1
Uganda_R7_2015	Protein	AXB49479.1
Uganda_R25_2015	Protein	AXB49651.1
Uganda_N10_2015	Protein	AXB49822.1
Uganda_R35_2015	Protein	AXB49995.1
Estonia_2014	Protein	SPS73500.1
Italy_26544_OG10_2010	Protein	AJZ77147.1
Italy_47_Ss_2008_2008	Protein	AOO54416.1
Portugal_OURT_88.3_1988	Protein	CAN10426.1
Spain_E75_1975	Protein	CBH29178.1
Russia_Georgia_2007	Protein	CBW46743.1
Kenya_Tk1_2005	Protein	AJL34090.1
Kenya_Bus_2006	Protein	AJL34255.1
Russia_Odintsovo_2014	Protein	CAN10176.1
Portugal_L60_1960	Protein	AIY22268.1
Portugal_NHV_1968	Protein	AIY22426.1
Russia_Kashino_2013	Protein	CAN10176.1
Benin_1997	Protein Protein	CAN10176.1 CAN10176.1
South_Africa_KNP_Pretorisuskop_1996	Protein	CAN10176.1
South_Africa_MGR_Mkuzi_1979	Protein	CAN10176.1
Malawi_Lil_1983	Protein	CAN10176.1
Kenya_1950	Protein	CAN10176.1
Namibia_Warthog_1980	Protein	CAN10176.1
South_Africa_Warmbaths_1987	Protein	CAN10176.1
Malawi_Tengani_1962	Protein	CAN10176.1
China_HLJ_2018	Protein	QBH90565.1
China_LN_2018	Protein	QBH90750.1
China_wbBS01_2018	Protein	QDL88108.1
Ukraine_Kyiv_2014	Protein	QED21655.1
Belgium_Etalle_wb_2018	Protein	QED90520.1
Lithuania_LT14_2014	Protein	QEY87883.1
South_Africa_1985
South_Africa_2_2008
Zambia_LIV_1983