Strain

Kenya_1950 (Region: Kenya ;  Strain: Kenya 1950;  Date: 1950)

Gene

RNA polymerase subunit 6

Description

Pseudogene,  VOCs Family: RNApol subunit6

Location

AY261360.1(-):92023-92451

GenBank Accession

CAN10169.1

Full name

DNA-directed RNA polymerase subunit 6 homolog      

CDS

ATGGCTGATAATGACAATGAGGATAGTATCATGGATGACCTCGTGGAGGAATATGTGGAAACGGAGGAGGAGAATTTCGTCGACAGTGAGGAGGAGTCCGAAGACAAGGACGAGATCGTGGAATCTCCGTCCATCTGTGAGGGCTTTGTGCAGGCCTCGTCGCAAACATTGGTCGTTATACCCGATAACGAGCGCATTACCTCCAACGTTTTAACGACCTTTGAAGCCACAAGGTTGGTCGCCGTTAGAGCACAACAATTGGCAATCAATGGATCTACAATGCTTAAAAAAAAATATAGCAGTCCTATTGATATAGCTAAGCAAGAACTCTTTAACAGGAAAATTCCACTGCTCGTTATGCGCTGCATCAAGGTAACACCCGATGGTCAAAAAATTGTTGAAATATGGAACCCCCGGGAAATGGGCATT

Protein

Not available

Catalytic Activity

a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + RNA(n+1)

Subunit

Component of the RNA polymerase that consists of at least 6 subunits.

Similarity

Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family.

Keywords

Complete proteome   DNA-directed RNA polymerase   Host cytoplasm   Reference proteome   Transcription   Nucleotidyltransferase   Transferase  

Feature

chain  DNA-directed RNA polymerase subunit 6 homolog

Uniprot

D4I5Q7   A9JL21   A0A0A1E334   P42484   P0C9D8   P0C9D7   + More
E0WMK7   A0A2X0RTW5   A0A0A1E0Q7   A0A0C5BC81   P0C9D9   A9JLU9   Q08399   P0C9D6  

Pubmed

18198370    25406173    26618713    11831707    21470447    25645905    + More
8332503   

EMBL

FN557520    CBH29170.1    AM712239    CAN10169.1    KM262844    KM102979    + More
KP055815    KX354450    AIY22261.1    AJZ77155.1    AKO62751.1    AOO54403.1    U18466    AY261366    AY261363    FR682468    CBW46735.1    MG939583    MG939587    MG939588    LS478113    AXZ95844.1    AXZ96032.1    AXZ96127.1    SPS73492.1    KM262845    AIY22419.1    KM111294    KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    AJL34083.1    AJL34248.1    AXB49298.1    AXB49472.1    AXB49644.1    AXB49815.1    AXB49988.1    AY261360    AM712240    CAN10417.1    L15411    AY261361   

Proteomes

UP000101090    UP000130745    UP000117635    UP000142390    UP000241813    UP000266411    + More
UP000000624    UP000000858    UP000000859    UP000141072    UP000110401    UP000101566    UP000105860    UP000000861    UP000108903    UP000000860   

Pfam

PF01192   RNA_pol_Rpb6

Interpro

IPR006110   Pol_omega/K/RPB6
IPR020708   DNA-dir_RNA_polK_14-18kDa_CS
IPR012293   RNAP_RPB6_omega
IPR036161   RPB6/omega_like_sf
IPR006111   RpoK/Rpb6

SUPFAM

SSF63562   SSF63562

Gene 3D

3.90.940.10    

ProteinModelPortal

D4I5Q7   A9JL21   A0A0A1E334   P42484   P0C9D8   P0C9D7   + More
E0WMK7   A0A2X0RTW5   A0A0A1E0Q7   A0A0C5BC81   P0C9D9   A9JLU9   Q08399   P0C9D6  

PDB

6GYK     E-value=2.16206e-05,     Score=109