ASFVdb The African Swine Fever Virus Database
Strain
Kenya_1950 (Region: Kenya ;  Strain: Kenya 1950;  Date: 1950)
Gene
BA71V-A238L (5EL)
Description
Pseudogene,  similar to African swine fever virus E75 strain E75 of INSD accession FN557520
GenBank Accession
Full name
IkB-like protein      
Alternative Name
Ankyrin repeat domain-containing protein A238L
p28
 

Sequence

CDS
ATGGATACGGTAGGCCTGTTTTCAGCCGAGGTAGAACACTTGTTTATTGAGTGGATTAAAAAACATATCAAAAAAGGAGACCTTACACTATTTGAGAGATTTTTTAAAGCAGATCCATGGATTGTCAATAGATGCGATCGAAGTAAAATCACGGTATTTATGTGGATATGCATCTATGGACGTTTAGACTTTTTAAGATTTCTTTTTAAACAAGAATCCTATCCCGGGGAAATAATAAGCCATTATAGAAGGGATAAAGATGGAAATTCTGTTTGGCATTATTTGGCGGAAAAAAAGAATCATCTCCTTTTGGAAGAAGTGCTGGAATATTTTGGAAAAATTGGCATCAAAGTTTGTTTTCGGAATTTTAATGGGATTACGCCCGTTATGAAGGCTGCAATGCGGGGTCGTACTCTAAGTGTCCTTTCTCTCATAAAATATGGAGCAAATCCGAACCAAAAAGACTATCTTAAAGGATTTAATACTTGGGATTGGGCAGTCTTTACAGGACACGCAGATTTAGTTAAATCTCTGAACAAGGACTACCAAAAACCCCTCTTCATGCATTTCCCTCTTTACAAACTGGATGTTTTCCATCGCAGGCACAAGAAAAAACCTAAAATTATTATCACTAGCTGTGAAGATAATGTCTATGAAAAACTTCCTGAACAGAATCCAAACTTTCTATGTGTAAAAAAACTTAACAAGTATGGTAAGTAG
Protein
Not available

Summary

Function
IkB-like protein that inhibits the binding of NF-kappa-B to DNA, thereby downregulating proinflammatory cytokine production (By similarity). Forms a heterodimer with the NF-kappa-B subunit RELA/p65 and prevents the activation of the NF-kappa-B transcription factor (By similarity). Inhibits calcineurin function, which is required for the induction of nuclear factor of activated T cells (NFAT)-dependent immune response genes. Prevents the binding of substrates to calcineurin without affecting the phosphatase activity (By similarity). Does not contain the serine residues that are phosphorylated by host IkB kinase and thus is not degraded following stimulation of the NFkB pathway (By similarity).
IkB-like protein that inhibits the binding of NF-kappa-B to DNA, thereby downregulating proinflammatory cytokine production (PubMed:8970976). Forms a heterodimer with the NF-kappa-B subunit RELA/p65 and prevents the activation of the NF-kappa-B transcription factor (By similarity). Inhibits calcineurin function, which is required for the induction of nuclear factor of activated T cells (NFAT)-dependent immune response genes (PubMed:23468591, PubMed:9677199). Prevents the binding of substrates to calcineurin without affecting the phosphatase activity (PubMed:23468591). Does not contain the serine residues that are phosphorylated by host IkB kinase and thus is not degraded following stimulation of the NFkB pathway (By similarity).
Subunit
Interacts with host PPIA. Interacts with host PPP3CA/Calcineurin (By similarity). Interacts with host RELA/p65; interaction of the 32 kDa form with host RELA results in the formation of a stable complex with NF-kappa-B (By similarity). Interacts with host PPP3R1 (By similarity). Interacts with host EP300; this interaction inhibits the association of host EP300 with host RELA, JUN and NFATC2 (By similarity).
Interacts with host PPIA (PubMed:9677199). Interacts with host PPP3CA/Calcineurin (PubMed:9677199, PubMed:11000210, PubMed:23468591). Interacts with host RELA/p65; interaction of the 32 kDa form with host RELA results in the formation of a stable complex with NF-kappa-B (By similarity). Interacts with host PPP3R1 (PubMed:23468591). Interacts with host EP300; this interaction inhibits the association of host EP300 with host RELA, JUN and NFATC2 (By similarity).
Similarity
Belongs to the asfivirus A238L family.
Keywords
ANK repeat   Complete proteome   Host cytoplasm   Host nucleus   Host-virus interaction   Inhibition of host NF-kappa-B by virus   Repeat   Ubl conjugation   3D-structure  
Feature
chain  IkB-like protein
Pfam
PF00023   Ank
Interpro
IPR020683   Ankyrin_rpt-contain_dom
IPR002110   Ankyrin_rpt
IPR036770   Ankyrin_rpt-contain_sf
SUPFAM
SSF48403   SSF48403
Gene 3D
PDB
4F0Z     E-value=3.42605e-09,     Score=145

Ontologies

Population Genetic Test Statistics

Pi
0.0792976
Theta
0.08647
Tajima's D
-0.4365445
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971    
China_AnhuiXCGQ_2018    
China_ASFV-SY18_2018    
Poland_Pol16_20186_o7_2016-2017    
Poland_Pol16_20538_o9_2016-2017    
Poland_Pol16_20540_o10_2016-2017    
Poland_Pol16_29413_o23_2016-2017    
Poland_Pol17_03029_C201_2016-2017    
Poland_Pol17_04461_C210_2016-2017    
Poland_Pol17_05838_C220_2016-2017    
Poland_ASFV_POL_Podlaskie_2015    
Uganda_R8_2015 Protein
AXB49268.1
Uganda_R7_2015 Protein
AXB49442.1
Uganda_R25_2015 Protein
AXB49614.1
Uganda_N10_2015 Protein
AXB49785.1
Uganda_R35_2015 Protein
AXB49958.1
Estonia_2014    
Italy_26544_OG10_2010    
Italy_47_Ss_2008_2008    
Portugal_OURT_88.3_1988    
Spain_E75_1975    
Russia_Georgia_2007    
Kenya_Tk1_2005 Protein
Protein
AJL34053.1
AJL34053.1
Kenya_Bus_2006 Protein
AJL34218.1
Russia_Odintsovo_2014    
Portugal_L60_1960    
Portugal_NHV_1968    
Russia_Kashino_2013    
Benin_1997    
South_Africa_KNP_Pretorisuskop_1996    
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983 Protein
AJL34053.1
Kenya_1950 Genetic Remain
AJL34053.1
Namibia_Warthog_1980    
South_Africa_Warmbaths_1987    
Malawi_Tengani_1962    
China_HLJ_2018    
China_LN_2018    
China_wbBS01_2018    
Ukraine_Kyiv_2014    
Belgium_Etalle_wb_2018    
Lithuania_LT14_2014    
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
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