Strain
Portugal_OURT_88.3_1988
(Region: Portugal; Strain: OURT 88/3; Date: 1988)
Gene
pE66L
Description
Annotated in NCBI,
VOCs Family: Unkown (BA71V-E66L)
Location
GenBank Accession
Full name
Uncharacterized protein E66L
+ More
Sequence
CDS
ATGTTGACAATGGTATCCTTAGCAAGATTTATAATAAATACAGCCTCTTTTAATAAAAGCATATATCCATTATCACAAGTATACGTTAAAATACATTTATCTCATAAGTATAACCATATTTTGTTTACATATAATATGCGCATTTATCTCATAAAGCGTAACCATATGTTGTTTACACATATGCTTATATCATGTAACTGA
Protein
MLTMVSLARFIINTASFNKSIYPLSQVYVKIHLSHKYNHILFTYNMRIYLIKRNHMLFTHMLISCN
Summary
Similarity
Belongs to the asfivirus E66L family.
Keywords
Complete proteome
Reference proteome
Feature
chain Uncharacterized protein E66L
Uniprot
EMBL
Proteomes
ProteinModelPortal
Ontologies
KEGG
Subcellular Location
From MSLVP
Single-Pass Membrane
Topology
Length:
66
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.28413
Exp number, first 60 AAs:
0.2825
Total prob of N-in:
0.18175
Length:
66
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.28413
Exp number, first 60 AAs:
0.2825
Total prob of N-in:
0.18175
outside
1 - 66
outside
1 - 66
Population Genetic Test Statistics
Pi
0.068142
Theta
0.0797757
Tajima's D
-0.5385857
CLR
0
Interpretation
No evidence of Selection
Genomic alignment in the CDS region
Multiple alignment of Orthologues
Gene Tree
Orthologous in Strains
| Strain | Availability | Status | Gene |
|---|---|---|---|
| Spain_BA71_1971 |
Protein |
AKO62816.1 |
|
| China_AnhuiXCGQ_2018 | |||
| China_ASFV-SY18_2018 | |||
| Poland_Pol16_20186_o7_2016-2017 | |||
| Poland_Pol16_20538_o9_2016-2017 | |||
| Poland_Pol16_20540_o10_2016-2017 | |||
| Poland_Pol16_29413_o23_2016-2017 | |||
| Poland_Pol17_03029_C201_2016-2017 | |||
| Poland_Pol17_04461_C210_2016-2017 | |||
| Poland_Pol17_05838_C220_2016-2017 | |||
| Poland_ASFV_POL_Podlaskie_2015 | |||
| Uganda_R8_2015 | |||
| Uganda_R7_2015 | |||
| Uganda_R25_2015 | |||
| Uganda_N10_2015 | |||
| Uganda_R35_2015 | |||
| Estonia_2014 | |||
| Italy_26544_OG10_2010 |
Protein |
AKM05537.1 |
|
| Italy_47_Ss_2008_2008 |
Protein |
AOO54506.1 |
|
| Portugal_OURT_88.3_1988 |
Protein Protein |
CAN10484.1 CAN10484.1 |
|
| Spain_E75_1975 |
Protein |
CBH29235.1 |
|
| Russia_Georgia_2007 | |||
| Kenya_Tk1_2005 | |||
| Kenya_Bus_2006 | |||
| Russia_Odintsovo_2014 | |||
| Portugal_L60_1960 |
Protein |
AIY22326.1 |
|
| Portugal_NHV_1968 |
Protein |
AIY22484.1 |
|
| Russia_Kashino_2013 | |||
| Benin_1997 |
Protein |
CAN10484.1 |
|
| South_Africa_KNP_Pretorisuskop_1996 | |||
| South_Africa_MGR_Mkuzi_1979 |
Protein |
CAN10484.1 |
|
| Malawi_Lil_1983 | |||
| Kenya_1950 | |||
| Namibia_Warthog_1980 | |||
| South_Africa_Warmbaths_1987 | |||
| Malawi_Tengani_1962 | |||
| China_HLJ_2018 | |||
| China_LN_2018 | |||
| China_wbBS01_2018 | |||
| Ukraine_Kyiv_2014 | |||
| Belgium_Etalle_wb_2018 | |||
| Lithuania_LT14_2014 | |||
| South_Africa_1985 | |||
| South_Africa_2_2008 | |||
| Zambia_LIV_1983 |
