ASFVdb The African Swine Fever Virus Database
Strain
Portugal_OURT_88.3_1988 (Region: Portugal;  Strain: OURT 88/3;  Date: 1988)
Gene
pEP152R
Description
Annotated in NCBI,  putative transmembrane protein
Location
AM712240.1(+):57387-57845
GenBank Accession
CAN10404.1
Full name
Uncharacterized protein EP152R      
 

Sequence

CDS
ATGTATTCCATTCTCATTGCATGCTTGGTGCTATTACTCTGTCTAGTTATATATGTCGGTCATCGTGCCGATCATGCACGAAAATATTTAGAAGGAATGTGGCATGGAGATCCGGTTTTTCTAAAACAGTCGGGGCTACAATCCTTTTATCTCTATATACAACCTGGCCACACATGTTTTTTTAGCATTGTGAATAAAAATGGTGAAAAGCTGATGGAAACCAAAATACCTTGTACGATAACAAATAAAATATATATGTTTTTTAAACCTATTTTTGAATTTCATGTTGTGATGGAAGACATACATAGATACTTACCAAAGCAGTTTAACTTTCTGTTAGACAGCGCAGAAGGTAAACTTATTTTAGAAAACAATCACGTTATTTATGCTGTATTGTATAAGGATAACTTCGCCACCGCACTAGGAAAAACGGTTGAAAAATATATAACACAAAATTAA
Protein
MYSILIACLVLLLCLVIYVGHRADHARKYLEGMWHGDPVFLKQSGLQSFYLYIQPGHTCFFSIVNKNGEKLMETKIPCTITNKIYMFFKPIFEFHVVMEDIHRYLPKQFNFLLDSAEGKLILENNHVIYAVLYKDNFATALGKTVEKYITQN

Summary

Similarity
Belongs to the asfivirus EP152R family.
Keywords
Complete proteome   Reference proteome   Signal  
Feature
chain  Uncharacterized protein EP152R
Uniprot
Q6JHT9   Q6JHU3   Q6JHT3   A9JL05   D4I5P4   A9JLS1   + More
A0A0A1E3I7   Q65149   E0WMJ4   A0A1B2LPZ8   P0CA61   P0CA62   P0CA59   A0A0C5AZE7   A0A0C5AZZ7  
Pubmed
19729182    18198370    25406173    26618713    11831707    21470447    + More
27497620    25645905   
EMBL
AY463914    AAS45766.1    AY463913    AAS45762.1    AY463915    AY463916    + More
AAS45772.1    AM712239    CAN10156.1    FN557520    CBH29157.1    AM712240    CAN10404.1    KM262844    KM262845    KM102979    KP055815    KX354450    AIY22247.1    AIY22406.1    AJZ77152.1    AKO62738.1    AOO54388.1    AF481875    AF481876    U18466    FR682468    CBW46722.1    KX533936    MG939583    MG939587    MG939588    LS478113    AOA33110.1    AXZ95831.1    AXZ96019.1    AXZ96114.1    SPS73479.1    AY261363    AY261366    AY261360    KM111294    AJL34070.1    KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    AJL34235.1    AXB49285.1    AXB49459.1    AXB49631.1    AXB49802.1    AXB49975.1   
Proteomes
UP000130745    UP000101090    UP000108903    UP000110401    UP000117635    UP000142390    + More
UP000241813    UP000266411    UP000000624    UP000141072    UP000000859    UP000000858    UP000000861    UP000105860    UP000101566   
PRIDE
P0CA59   
ProteinModelPortal
Q6JHT9   Q6JHU3   Q6JHT3   A9JL05   D4I5P4   A9JLS1   + More
A0A0A1E3I7   Q65149   E0WMJ4   A0A1B2LPZ8   P0CA61   P0CA62   P0CA59   A0A0C5AZE7   A0A0C5AZZ7  
PDB
5K18     E-value=1.23644,     Score=68

Ontologies

KEGG
vg:22220438    

Subcellular Location

From MSLVP
Cytoplasm

Topology

Length:
152
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.29444
Exp number, first 60 AAs:
21.40948
Total prob of N-in:
0.58691
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  21
inside
22  -  152
 
 

Population Genetic Test Statistics

Pi
0.0459998
Theta
0.0500616
Tajima's D
-0.4512478
CLR
0.358705
Interpretation
No evidence of Selection

Genomic alignment in the CDS region

 
 

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
 AKO62738.1
China_AnhuiXCGQ_2018 Protein
 AYW34028.1
China_ASFV-SY18_2018 Protein
 AKO62738.1
Poland_Pol16_20186_o7_2016-2017 Protein
 AXZ95831.1
Poland_Pol16_20538_o9_2016-2017 Protein
 CAN10156.1
Poland_Pol16_20540_o10_2016-2017 Protein
 CAN10156.1
Poland_Pol16_29413_o23_2016-2017 Protein
 CAN10156.1
Poland_Pol17_03029_C201_2016-2017 Protein
 AXZ96019.1
Poland_Pol17_04461_C210_2016-2017 Protein
 AXZ96114.1
Poland_Pol17_05838_C220_2016-2017 Protein
 CAN10156.1
Poland_ASFV_POL_Podlaskie_2015 Protein
 CAN10156.1
Uganda_R8_2015 Protein
Protein
 CAN10156.1
AXB49285.1
Uganda_R7_2015 Protein
Protein
 CAN10156.1
AXB49459.1
Uganda_R25_2015 Protein
Protein
 CAN10156.1
AXB49631.1
Uganda_N10_2015 Protein
Protein
 CAN10156.1
AXB49802.1
Uganda_R35_2015 Protein
Protein
 CAN10156.1
AXB49975.1
Estonia_2014 Protein
 SPS73479.1
Italy_26544_OG10_2010 Protein
 AJZ77152.1
Italy_47_Ss_2008_2008 Protein
 AOO54388.1
Portugal_OURT_88.3_1988 Protein
 CAN10404.1
Spain_E75_1975 Protein
 CBH29157.1
Russia_Georgia_2007 Protein
 CBW46722.1
Kenya_Tk1_2005 Protein
Protein
 CAN10156.1
AJL34070.1
Kenya_Bus_2006 Protein
Protein
 CAN10156.1
AJL34235.1
Russia_Odintsovo_2014 Protein
 CAN10156.1
Portugal_L60_1960 Protein
 AIY22247.1
Portugal_NHV_1968 Protein
 AIY22406.1
Russia_Kashino_2013 Protein
 CAN10156.1
Benin_1997 Protein
Protein
 CAN10156.1
CAN10156.1
South_Africa_KNP_Pretorisuskop_1996 Protein
 CAN10156.1
South_Africa_MGR_Mkuzi_1979 Protein
 CAN10156.1
Malawi_Lil_1983 Protein
 CAN10156.1
Kenya_1950 Protein
 CAN10156.1
Namibia_Warthog_1980 Protein
 CAN10156.1
South_Africa_Warmbaths_1987 Protein
 CAN10156.1
Malawi_Tengani_1962 Protein
 CAN10156.1
China_HLJ_2018 Protein
 QBH90544.1
China_LN_2018 Protein
 QBH90729.1
China_wbBS01_2018 Protein
 QDL88087.1
Ukraine_Kyiv_2014 Protein
Protein
 QED21619.1
QED21620.1
Belgium_Etalle_wb_2018 Protein
 QED90499.1
Lithuania_LT14_2014 Protein
 QEY87862.1
South_Africa_1985 Protein
 QGM12910.1
South_Africa_2_2008 Protein
 QGM12836.1
Zambia_LIV_1983 Protein
 QGM12718.1
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号
In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Cancel Go
Change my password
Enter new password
Reenter new password
Cancel Go
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Cancel Regist
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.
OK