Strain
Portugal_OURT_88.3_1988
(Region: Portugal; Strain: OURT 88/3; Date: 1988)
Gene
pKP93L, partial
Description
Annotated in NCBI,
putative transmembrane protein
Location
GenBank Accession
Full name
Uncharacterized membrane protein KP93L/DP93R
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Uncharacterized membrane protein KP93L
Uncharacterized membrane protein KP93L
Sequence
CDS
ATGTTTTTTTTTGGGATTTTTAGGTGCAACATGGATCATTGGACTACCAAGAGGCAGGTCTATATCTACTTATGTTTCTCATTGATGACAATAGCATTAATTTGCTATCTTATACATATCTGTTGTCATACGAAAAAAAACGTTGTTACTAACGCGCTGCCTTCAAACAACATGGCGCTAATACCATACACGCCTTCAAAC
Protein
MFFFGIFRCNMDHWTTKRQVYIYLCFSLMTIALICYLIHICCHTKKNVVTNALPSNNMALIPYTPSN
Summary
Miscellaneous
Encoded wby inverted terminal repeats (ITR) sequences.
Encoded wby inverted terminal repeats (ITR).
Encoded wby inverted terminal repeats (ITR).
Similarity
Belongs to the asfivirus KP93L family.
Keywords
Complete proteome
Glycoprotein
Host membrane
Membrane
Reference proteome
Transmembrane
Transmembrane helix
Feature
chain Uncharacterized membrane protein KP93L/DP93R
Uniprot
EMBL
Proteomes
ProteinModelPortal
Ontologies
KEGG
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
67
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.9988
Exp number, first 60 AAs:
21.99158
Total prob of N-in:
0.49405
POSSIBLE N-term signal
sequence
outside
1 - 19
TMhelix
20 - 42
inside
43 - 67
Population Genetic Test Statistics
Pi
0.1129691
Theta
0.1591004
Tajima's D
-0.889291
CLR
0.021143
Interpretation
No evidence of Selection
Genomic alignment in the CDS region
Multiple alignment of Orthologues
Gene Tree
Orthologous in Strains
| Strain | Availability | Status | Gene |
|---|---|---|---|
| Spain_BA71_1971 |
Protein Protein |
AKO62683.1 AKO62841.1 |
|
| China_AnhuiXCGQ_2018 | |||
| China_ASFV-SY18_2018 | |||
| Poland_Pol16_20186_o7_2016-2017 | |||
| Poland_Pol16_20538_o9_2016-2017 | |||
| Poland_Pol16_20540_o10_2016-2017 | |||
| Poland_Pol16_29413_o23_2016-2017 | |||
| Poland_Pol17_03029_C201_2016-2017 | |||
| Poland_Pol17_04461_C210_2016-2017 | |||
| Poland_Pol17_05838_C220_2016-2017 | |||
| Poland_ASFV_POL_Podlaskie_2015 | |||
| Uganda_R8_2015 | |||
| Uganda_R7_2015 | |||
| Uganda_R25_2015 | |||
| Uganda_N10_2015 | |||
| Uganda_R35_2015 | |||
| Estonia_2014 | |||
| Italy_26544_OG10_2010 |
Protein |
CBH29099.1 |
|
| Italy_47_Ss_2008_2008 |
Protein |
AOO54538.1 |
|
| Portugal_OURT_88.3_1988 |
Protein |
CAN10349.1 |
|
| Spain_E75_1975 |
Protein Protein |
CBH29099.1 CBH29099.1 |
|
| Russia_Georgia_2007 | |||
| Kenya_Tk1_2005 | |||
| Kenya_Bus_2006 | |||
| Russia_Odintsovo_2014 | |||
| Portugal_L60_1960 |
Protein |
AIY22188.1 |
|
| Portugal_NHV_1968 |
Protein |
AIY22351.1 |
|
| Russia_Kashino_2013 | |||
| Benin_1997 | |||
| South_Africa_KNP_Pretorisuskop_1996 | |||
| South_Africa_MGR_Mkuzi_1979 | |||
| Malawi_Lil_1983 | |||
| Kenya_1950 | |||
| Namibia_Warthog_1980 | |||
| South_Africa_Warmbaths_1987 | |||
| Malawi_Tengani_1962 | |||
| China_HLJ_2018 | |||
| China_LN_2018 | |||
| China_wbBS01_2018 | |||
| Ukraine_Kyiv_2014 | |||
| Belgium_Etalle_wb_2018 | |||
| Lithuania_LT14_2014 | |||
| South_Africa_1985 | |||
| South_Africa_2_2008 | |||
| Zambia_LIV_1983 |
