ASFVdb The African Swine Fever Virus Database
Strain
Poland_ASFV_POL_Podlaskie_2015 (Region: Poland;  Strain: ASFV/POL/2015/Podlaskie;  Date: 2015)
Gene
pB438L
Description
Annoated by sequence mapping,  putative product contains cell attachment sequence RGD
GenBank Accession
Full name
Structural protein p49      
 

Sequence

CDS
ATGTATCATGATTATGCTTCAAAGCTGTTAGCCGATTATAGGTCAGATCCACCTCTTTGGGAAAGCGATTTGCCGCGTCATAACCGGTATTCTGATAATATACTAAATTCCCGGTACTGCGGCAACAAAAATGGAGCTGCGCCTGTATACAATGAATACACTAATAGTCCTGAAAAGGCTGAAAAGGGATTGCAACTCAGTGATCTACGTAACTTTTCTTTTATGCTGAACCCTCAGCACAAAAACATTGGTTACGGCGATGCGCAAGATCTGGAGCCGTACAGCTCCATTCCAAAAAATAAACTTTTTAATCATTTTAAAAATCATCGTCCTGCTTTTTCAACCCATACGGAAAACCTAATTAGGCGCAATGTTGTTCGTACGGAAAAAAAAACATTTCCGCAGGTGGCTAGCTTAAAGGGCACACAGAAAAATTGTCTGACCCAGCCTTCCTCATTGCCTTCCTTAAAAAACCCAAAAAATAGTTCGGTTCCTTCTACGAGGTTCAGCGAGCACACAAAATTTTTTTCGTACGAGGATCTTCCTAAACTCAGAACAAAGGGTACCATTAAGCATGAGCAGCACCTTGGCGATCAGATGCCGGGCCAGCACTATAACGGATATATTCCGCACAAAGACGTGTACAATATTTTGTGTTTAGCGCACAATCTACCTGCGTCGGTAGAAAAAGGGATTGCAGGTAGAGGTATTCCTTTAGGAAATCCACATGTCAAACCGAACATAGAGCAGGAACTCATAAAATCCACCAGTACCTACACGGACGTGCCGATGCTTGGTCCCCTTCCGCCCAAAGATTCGCAACACGGCAGAGAATACCAGGAATTTTCCGCAAATAGACATATGCTACAAGTATCTAATATACTACATTCTGTGTTTGCTAATCATTCTATAAAGCCACAAATCCTAGAAGACATACCGGTACTCAATGCACAACTAACAAGCATAAAGCCGGTAAGCCCATTTTTAAACAAAGCGTATCAAACCCATTATATGGAAAATATTGTTACCTTGGTGCCCCGGTTTAAGAGTATTGCCAACTACTCAAGCCCTATACCGAATTATTCTAAAAGAAATAGCGGTCAGGCTGAATATTTTGATACCTCAAAGCAAACAATTTCTAGACACAATAATTATATACCTAAATATACGGGAGGAATTGGAGATTCCAAACTAGACAGCACCTTTCCTAAAGATTTCAACGCCTCCTCGGTACCGTTAACAAGCGCGGAAAAGGACCATTCCCTGCGGGGAGACAACTCAGCATGTTGCATCTCATCTATATCTCCATCATTGTAG
Protein
MYHDYASKLLADYRSDPPLWESDLPRHNRYSDNILNSRYCGNKNGAAPVYNEYTNSPEKAEKGLQLSDLRNFSFMLNPQHKNIGYGDAQDLEPYSSIPKNKLFNHFKNHRPAFSTHTENLIRRNVVRTEKKTFPQVASLKGTQKNCLTQPSSLPSLKNPKNSSVPSTRFSEHTKFFSYEDLPKLRTKGTIKHEQHLGDQMPGQHYNGYIPHKDVYNILCLAHNLPASVEKGIAGRGIPLGNPHVKPNIEQELIKSTSTYTDVPMLGPLPPKDSQHGREYQEFSANRHMLQVSNILHSVFANHSIKPQILEDIPVLNAQLTSIKPVSPFLNKAYQTHYMENIVTLVPRFKSIANYSSPIPNYSKRNSGQAEYFDTSKQTISRHNNYIPKYTGGIGDSKLDSTFPKDFNASSVPLTSAEKDHSLRGDNSACCISSISPSL

Summary

Function
Plays an essential role in the formation of infectious virus particles, especially in the acquisition of the icosahedral morphology.
Similarity
Belongs to the asfivirus p49 structural protein family.
Keywords
Complete proteome   Late protein   Reference proteome   Virion  
Feature
chain  Structural protein p49

Ontologies

KEGG

Subcellular Location

From MSLVP
Capsid
From Uniprot
Virion  

Topology

Length:
438
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00439
outside
1  -  438
 
 

Population Genetic Test Statistics

Pi
0.0352581
Theta
0.0455105
Tajima's D
-0.7118055
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62757.1
China_AnhuiXCGQ_2018 Protein
AYW34047.1
China_ASFV-SY18_2018 Protein
AKO62757.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95850.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10175.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10175.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10175.1
Poland_Pol17_03029_C201_2016-2017 Protein
AXZ96038.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96133.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10175.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10175.1
Uganda_R8_2015 Protein
AXB49304.1
Uganda_R7_2015 Protein
AXB49478.1
Uganda_R25_2015 Protein
AXB49650.1
Uganda_N10_2015 Protein
AXB49821.1
Uganda_R35_2015 Protein
AXB49994.1
Estonia_2014 Protein
SPS73499.1
Italy_26544_OG10_2010 Protein
AJZ77070.1
Italy_47_Ss_2008_2008 Protein
AOO54415.1
Portugal_OURT_88.3_1988 Protein
CAN10425.1
Spain_E75_1975 Protein
CBH29177.1
Russia_Georgia_2007 Protein
CBW46742.1
Kenya_Tk1_2005 Protein
AJL34089.1
Kenya_Bus_2006 Protein
AJL34254.1
Russia_Odintsovo_2014 Protein
CAN10175.1
Portugal_L60_1960 Protein
AIY22267.1
Portugal_NHV_1968 Protein
AIY22425.1
Russia_Kashino_2013 Protein
CAN10175.1
Benin_1997 Protein
Protein
CAN10175.1
CAN10175.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10175.1
South_Africa_MGR_Mkuzi_1979 Protein
CAN10175.1
Malawi_Lil_1983 Protein
CAN10175.1
Kenya_1950 Protein
CAN10175.1
Namibia_Warthog_1980 Protein
CAN10175.1
South_Africa_Warmbaths_1987 Protein
CAN10175.1
Malawi_Tengani_1962 Protein
CAN10175.1
China_HLJ_2018 Protein
QBH90564.1
China_LN_2018 Protein
QBH90749.1
China_wbBS01_2018 Protein
QDL88107.1
Ukraine_Kyiv_2014 Protein
Protein
QED21653.1
QED21654.1
Belgium_Etalle_wb_2018 Protein
QED90519.1
Lithuania_LT14_2014 Protein
QEY87882.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号

In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Change my password
Enter new password
Reenter new password
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.