ASFVdb The African Swine Fever Virus Database
Strain
Poland_Pol17_05838_C220_2016-2017 (Region: Poland;  Strain: Pol17_05838_C220;  Date: 2016-2017)
Gene
pD345L
Description
Annoated by sequence mapping,  VOCs Family: Unknown (BA71V-D345L)
GenBank Accession
Full name
Uncharacterized protein D345L      
 

Sequence

CDS
ATGGAAACCTTTGTACGCCTGTTTAAAGACTCTCCTCAGCAGCGCTCCGATGCCTGGCATGCTATTCGTCGCACTCAGGTGGGTGGCTCTGACCTTGCCAGCGTTTTAGGTTTAAACCCTTACAAAAGCTATTATATAACCTTGGCGGAAAAAGCAAATCTTTTTAAGAAGAATTTGAACCGCGCTGCTTGTAGCTGGGGAACCCTTTTTGAGCGTGTTAGTAAAGATCTGCTTGAGTTGTTCTGCCAAACCACCGTCATAGGTGACAATATTCATATTGATGGGACCTATTTGGGATACCCCGGACATAGTAATAGCCCCGATGGGTTTTGTCACCTAACGCTGGGATACACTCAACAGTCCTGGGAAATCAAAACAATTTTTAACAACGTACGCTATGAGGCCACGAAACGCATCCCCGTGCTGGTAGAAATAAAGTCCCCATTCAACCGAAAAATAAAAAACTCGGTGCCCTCCTACTATATGCCGCAAATACAATCCGGTCTTGCCCTTTCGCCGCCTATCTCTATGGGCATCTACGTCGAGGCCATGTTTCGCGTGTGCGGCATTCATCAGCTGGGATCGAATAATGAGACCAATACGGATATCCACCCTCCAGAGTCCATGCTCCCGCTTGCCTGGGGAATCATCACGATCTGCTCTACACAGGAGCACACCGAGGCTCCTCAAGATTTTGGCACGCTCGACGCGGAAACATTTCGCCAACTACTTGAAACGCTGTATCAAAAAGATCAGTACACTATTCACTATTCTATGCCTTATGAAACCGCGTGTCCCGAAATGCCAAATGTGGTTGGCTACTTTGGATGGAAGGTCTTTATCTTTCAAATAATTCCAGTTATGAAACATCCCCAGTTTTTAAAAGACAAATATCCCATCATACAACAGTTCTTACGTGACCTACATACTATTAAAGCCTCGCCATCCCCCATGGAGATGTATGAAAAAATTTGCTGCTCAGAGGAAAGCGCTCTATCCACAGAGGACATCGACAATTTTACAGATATGCTTACTTAG
Protein
METFVRLFKDSPQQRSDAWHAIRRTQVGGSDLASVLGLNPYKSYYITLAEKANLFKKNLNRAACSWGTLFERVSKDLLELFCQTTVIGDNIHIDGTYLGYPGHSNSPDGFCHLTLGYTQQSWEIKTIFNNVRYEATKRIPVLVEIKSPFNRKIKNSVPSYYMPQIQSGLALSPPISMGIYVEAMFRVCGIHQLGSNNETNTDIHPPESMLPLAWGIITICSTQEHTEAPQDFGTLDAETFRQLLETLYQKDQYTIHYSMPYETACPEMPNVVGYFGWKVFIFQIIPVMKHPQFLKDKYPIIQQFLRDLHTIKASPSPMEMYEKICCSEESALSTEDIDNFTDMLT

Summary

Similarity
Belongs to the asfivirus D345L family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Uncharacterized protein D345L
EMBL
AM712239    CAN10208.1    FN557520    CBH29209.1    AM712240    CAN10458.1    + More
KM262844    KM262845    KM102979    KP055815    KX354450    AIY22300.1    AIY22458.1    AJZ77092.1    AKO62790.1    AOO54469.1    U18466    FR682468    CBW46775.1    MG939583    MG939588    LS478113    AXZ95883.1    AXZ96166.1    SPS73532.1    AY261366    X71982    AY261361    AY261363    KM111294    AJL34122.1    KM111295    MH025916    MH025917    MH025918    MH025919    MH025920    AJL34287.1    AXB49338.1    AXB49512.1    AXB49684.1    AXB49855.1    AXB50028.1    AY261360    CP010536    AJG21164.1    FOKX01000013    SFD19029.1    DODX01000243    HBO80000.1    LN899823    LN899825    LN899826    LN899822    CUV24053.1    CUV36078.1    CUV38840.1    CUV63889.1    CP022765    AXV97415.1    LN899824    CUV28847.1    DF237661    GAQ91011.1    CP004012    AGH85386.1    CP003153    AEV26181.1    NBSQ01000002    PNE75420.1    FCOJ02000064    SAK87820.1    JSZO01000013    KHK54105.1    LPIX01000046    KWE04925.1    LGIO01000018    KPD17356.1    CP001220    ACY32249.1    BDQJ01000004    AWTP01000140    AWOU01000024    GAW78585.1    KGH06914.1    KGH10690.1    FOAJ01000002    SEK41826.1    LT839607    SME65108.1    KJ614390    KU702948    KU702950    KU702952    AIB52138.1    AMN83364.1    AMN84348.1    AMN85334.1    FCOK02000003    SAL15527.1    CP015698    ARV17644.1    MESK01000050    OGB65278.1   
Pfam
PF09588   YqaJ
PF10021   DUF2263
Interpro
IPR011604   Exonuc_phg/RecB_C
IPR019080   YqaJ_viral_recombinase
IPR011335   Restrct_endonuc-II-like
IPR017482   Phage_endonuclease_put
IPR019261   DUF2263
IPR012664   CHP02452
SUPFAM
SSF52980   SSF52980
Gene 3D
PDB
5YEU     E-value=0.228982,     Score=79

Ontologies

KEGG

Subcellular Location

From MSLVP
Cytoplasm

Topology

Length:
345
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.22053
Exp number, first 60 AAs:
0.00862
Total prob of N-in:
0.01633
outside
1  -  345
 
 

Population Genetic Test Statistics

Pi
0.0402181
Theta
0.0478504
Tajima's D
-0.6335525
CLR
0.14433
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62790.1
China_AnhuiXCGQ_2018 Protein
AYW34080.1
China_ASFV-SY18_2018 Protein
AKO62790.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95883.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10208.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10208.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10208.1
Poland_Pol17_03029_C201_2016-2017 Protein
CAN10208.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96166.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10208.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10208.1
Uganda_R8_2015 Protein
AXB49338.1
Uganda_R7_2015 Protein
AXB49512.1
Uganda_R25_2015 Protein
AXB49684.1
Uganda_N10_2015 Protein
AXB49855.1
Uganda_R35_2015 Protein
AXB50028.1
Estonia_2014 Protein
SPS73532.1
Italy_26544_OG10_2010 Protein
AJZ77092.1
Italy_47_Ss_2008_2008 Protein
AOO54469.1
Portugal_OURT_88.3_1988 Protein
CAN10458.1
Spain_E75_1975 Protein
CBH29209.1
Russia_Georgia_2007 Protein
CBW46775.1
Kenya_Tk1_2005 Protein
AJL34122.1
Kenya_Bus_2006 Protein
AJL34287.1
Russia_Odintsovo_2014 Protein
CAN10208.1
Portugal_L60_1960 Protein
AIY22300.1
Portugal_NHV_1968 Protein
AIY22458.1
Russia_Kashino_2013 Protein
CAN10208.1
Benin_1997 Protein
Protein
CAN10208.1
CAN10208.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10208.1
South_Africa_MGR_Mkuzi_1979 Protein
CAN10208.1
Malawi_Lil_1983 Protein
CAN10208.1
Kenya_1950 Protein
CAN10208.1
Namibia_Warthog_1980 Protein
CAN10208.1
South_Africa_Warmbaths_1987 Protein
CAN10208.1
Malawi_Tengani_1962 Protein
CAN10208.1
China_HLJ_2018 Protein
QBH90597.1
China_LN_2018 Protein
QBH90782.1
China_wbBS01_2018 Protein
QDL88140.1
Ukraine_Kyiv_2014 Protein
QED21712.1
Belgium_Etalle_wb_2018 Protein
QED90552.1
Lithuania_LT14_2014 Protein
QEY87915.1
South_Africa_1985 Protein
CAN10208.1
South_Africa_2_2008 Protein
CAN10208.1
Zambia_LIV_1983    
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