ASFVdb The African Swine Fever Virus Database
Strain
Poland_Pol17_03029_C201_2016-2017 (Region: Poland;  Strain: Pol17_03029_C201;  Date: 2016-2017)
Gene
pE423R
Description
Annoated by sequence mapping,  VOCs Family: Unknown (BA71V-E423R)
GenBank Accession
Full name
Uncharacterized protein E423R      
 

Sequence

CDS
ATGTTGTGGCGCAATGAAATTACAGAATTTATGGACCAACTTTCCAAGTATTCTCAAGAAATCTTAAAAACGTTTAAGCAATTGCGTCCTAGTGAATATAAACAATACAATGAATTTTTAACACAAGTTACACCGTTGCTGCAAAAAACCCCTGAAAAAATTCCAGAGTTGGTTGACCATATATTCAATTACCTAGACAACGTTGAAAAAATTTGTGAGCTCCTCGTGAATGCTAGCTCAATTATTATTAGTTCAAAAATACGAGAACAAGTAAAACACGGAATGAGCTTCAGCTATAAAGCCGACCTCGACTCCTTGGCGGACATTCTCTCTCAAAAACAGTACGTGCTTATGCATCTTTCAAAAAATATTGCGGCCGAGTATTTTAATACGTGTTTAAACCAAGGGAAATCCAAGTTAGATCTCAAAGCTGCCTCTGTATTTTATAGTAGTCGTTCCCGAACGGCAAGCTCAGCAGAACTCTATAGAAAAATGCTATACGCCTATGGTTCACCGCAGGAAATTAATTATTATACTGAAAAAGCCCGAAATAAGACGTTGGATGTGGAGGAGAGCGACAGCATGGCCATCATCGAACGAACGGCCCGACACAACCTTTCCCTTATGCACCCGCTAGAAGCCATGGGGCTTACCTTTGGGGCAACCAACACGGACGCCGACCCGGAGGATCTGAAGGACAAAACGGTGATAAATTTAACGCTCCCGCAGGCAACAGAAAGCATCACCTACCATCTTAAATCCCTAATGCAGCTAAAAAAAGTAAGTACGGCTTCAGGACTAAATACAAACATTTTGAAAGCATTTGATAATATTATTTCCACCCCTGTGAAAAAAAATAAAATGGCCTCCAAGTTGGCGCCCGGGATGGATGTCGTGTTCACTAGCGATAACGGAAAAACATTTTTTACTAAAAACATTTTAAGCAAAAACATGCTAGCGGGGCCCAAAGAGCGGGTGTTTGCATATAATAATCTCATTAGTAATTTAAATAACTCCTGTTTCATACAAAATCACAACGATTTTTTAAGACAGCAGGACTCTTGGCCCTTCTATGACGCGCACAATTTTACCAACAAGTTTTTAATGCAGCCTATTTTTTCGGGGCAGACCCGTCCTCGGCTTCAGGGAGCCATGGAGGCGGCGCATGTGGAAACGCATCTCACGGCATTTTTACAAAGTATTCAGCCCTCTAGGCCACAAGATCCCTCTGTTTTGGCTTCCCCCAAGTTATCTGCTCTAATCTTGAACTAA
Protein
MLWRNEITEFMDQLSKYSQEILKTFKQLRPSEYKQYNEFLTQVTPLLQKTPEKIPELVDHIFNYLDNVEKICELLVNASSIIISSKIREQVKHGMSFSYKADLDSLADILSQKQYVLMHLSKNIAAEYFNTCLNQGKSKLDLKAASVFYSSRSRTASSAELYRKMLYAYGSPQEINYYTEKARNKTLDVEESDSMAIIERTARHNLSLMHPLEAMGLTFGATNTDADPEDLKDKTVINLTLPQATESITYHLKSLMQLKKVSTASGLNTNILKAFDNIISTPVKKNKMASKLAPGMDVVFTSDNGKTFFTKNILSKNMLAGPKERVFAYNNLISNLNNSCFIQNHNDFLRQQDSWPFYDAHNFTNKFLMQPIFSGQTRPRLQGAMEAAHVETHLTAFLQSIQPSRPQDPSVLASPKLSALILNX

Summary

Similarity
Belongs to the asfivirus E423R family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Uncharacterized protein E423R
PDB
4XFK     E-value=7.66539,     Score=67

Ontologies

KEGG

Subcellular Location

From MSLVP
Others-Single

Topology

Length:
424
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00111
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00464
outside
1  -  424
 
 

Population Genetic Test Statistics

Pi
0.0305392
Theta
0.0389079
Tajima's D
-1.0100125
CLR
0
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62807.1
China_AnhuiXCGQ_2018 Protein
AYW34097.1
China_ASFV-SY18_2018 Protein
AKO62807.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95898.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10226.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10226.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10226.1
Poland_Pol17_03029_C201_2016-2017 Protein
CAN10226.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96181.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10226.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10226.1
Uganda_R8_2015 Protein
AXB49355.1
Uganda_R7_2015 Protein
AXB49529.1
Uganda_R25_2015 Protein
AXB49701.1
Uganda_N10_2015 Protein
AXB49872.1
Uganda_R35_2015 Protein
AXB50045.1
Estonia_2014 Protein
SPS73549.1
Italy_26544_OG10_2010 Protein
AJZ77072.1
Italy_47_Ss_2008_2008 Protein
AOO54495.1
Portugal_OURT_88.3_1988 Protein
CAN10475.1
Spain_E75_1975 Protein
CBH29226.1
Russia_Georgia_2007 Protein
CBW46792.1
Kenya_Tk1_2005 Protein
AJL34139.1
Kenya_Bus_2006 Protein
AJL34304.1
Russia_Odintsovo_2014 Protein
CAN10226.1
Portugal_L60_1960 Protein
AIY22317.1
Portugal_NHV_1968 Protein
AIY22475.1
Russia_Kashino_2013 Protein
CAN10226.1
Benin_1997 Protein
Protein
CAN10226.1
CAN10226.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10226.1
South_Africa_MGR_Mkuzi_1979 Protein
CAN10226.1
Malawi_Lil_1983 Protein
CAN10226.1
Kenya_1950 Protein
CAN10226.1
Namibia_Warthog_1980 Protein
CAN10226.1
South_Africa_Warmbaths_1987 Protein
CAN10226.1
Malawi_Tengani_1962 Protein
CAN10226.1
China_HLJ_2018 Protein
QBH90614.1
China_LN_2018 Protein
QBH90799.1
China_wbBS01_2018 Protein
QDL88157.1
Ukraine_Kyiv_2014 Protein
QED21739.1
Belgium_Etalle_wb_2018 Protein
QED90569.1
Lithuania_LT14_2014 Protein
QEY87932.1
South_Africa_1985 Protein
QGM12940.1
South_Africa_2_2008 Protein
QGM12866.1
Zambia_LIV_1983    
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