ASFVdb The African Swine Fever Virus Database
Strain
Spain_E75_1975 (Region: Spain;  Strain: E75;  Date: 1975)
Gene
MGF 360-20R
Description
Annotated in NCBI,  member of multigene family 360
GenBank Accession
Full name
Protein MGF 360-20R      
 

Sequence

CDS
TATGCCTACTCCACTTTCTCTACAGGCTCTTGCTAAAAAAGTACTGGCCACACAGCACATATCTAAAGATCACCTTTATTTTGAAATATTGTGGTTTATGGTGGCATTCTTTGACGCCTACAGTCTTTAA
Protein
MPTPLSLQALAKKVLATQHISKDHLYFEILWFMVAFFDAYSL

Summary

Function
Plays a role in virus cell tropism, and may be required for efficient virus replication in macrophages.
Similarity
Belongs to the asfivirus MGF 360 family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Protein MGF 360-20R

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
42
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.09395
Exp number, first 60 AAs:
1.09395
Total prob of N-in:
0.08055
outside
1  -  42
 
 

Population Genetic Test Statistics

Pi
0.1934883
Theta
0.3147871
Tajima's D
-1.6077826
CLR
1.966067
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62839.1
China_AnhuiXCGQ_2018    
China_ASFV-SY18_2018    
Poland_Pol16_20186_o7_2016-2017    
Poland_Pol16_20538_o9_2016-2017    
Poland_Pol16_20540_o10_2016-2017    
Poland_Pol16_29413_o23_2016-2017    
Poland_Pol17_03029_C201_2016-2017    
Poland_Pol17_04461_C210_2016-2017    
Poland_Pol17_05838_C220_2016-2017    
Poland_ASFV_POL_Podlaskie_2015    
Uganda_R8_2015    
Uganda_R7_2015    
Uganda_R25_2015    
Uganda_N10_2015    
Uganda_R35_2015    
Estonia_2014    
Italy_26544_OG10_2010 Protein
AKM05539.1
Italy_47_Ss_2008_2008 Protein
AOO54536.1
Portugal_OURT_88.3_1988    
Spain_E75_1975 Protein
CBH29259.1
Russia_Georgia_2007    
Kenya_Tk1_2005    
Kenya_Bus_2006    
Russia_Odintsovo_2014    
Portugal_L60_1960    
Portugal_NHV_1968    
Russia_Kashino_2013    
Benin_1997    
South_Africa_KNP_Pretorisuskop_1996    
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983    
Kenya_1950    
Namibia_Warthog_1980    
South_Africa_Warmbaths_1987    
Malawi_Tengani_1962    
China_HLJ_2018    
China_LN_2018    
China_wbBS01_2018    
Ukraine_Kyiv_2014    
Belgium_Etalle_wb_2018    
Lithuania_LT14_2014    
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

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