ASFVdb The African Swine Fever Virus Database
Strain
South_Africa_KNP_Pretorisuskop_1996 (Region: South Africa, Kruger National Park;  Strain: Pretorisuskop/96/4;  Date: 1996)
Gene
MGF 100-3L
Description
Annoated by sequence mapping,  Member of multigene family 100 (DP146L)
GenBank Accession
Full name
Protein MGF 100-3L      
 

Sequence

CDS
ATGGGGAACCGCCTTAACGGAAGTTACCTATCAAATACGGACATGTCAATAGAGGATGAGCAAAATAAGTATAATGAAGCCATAGAGGATTGTAAGATTTGCAATAAAGTATATATAAAACAGTCTGGAAAGATTGATAAAAAAGAGTTAAATCGGATTAAAAAGTTAGACTTTTTCTATTCTCAAAAAACCGACTATGAAATAGAACGTATGTTTTTTAACGTGCCTAATGGTACCTTTCTGCTTACGGACGATGCAACCAATGAAAATCTATTTATTGCTCAAAAAGATCTAGAAAATGGCTCACTAAACATAGCAAAACTGGAGTTTAAAGGAAAAGCATTATATATTGATGGCAAAGATTACTTCTCTCTAGAAAACTATCTTAAAACGTTTGAGGATTTTTACAAATACCCACTAATTTACAATAAAAATGAGTAA
Protein
MGNRLNGSYLSNTDMSIEDEQNKYNEAIEDCKICNKVYIKQSGKIDKKELNRIKKLDFFYSQKTDYEIERMFFNVPNGTFLLTDDATNENLFIAQKDLENGSLNIAKLEFKGKALYIDGKDYFSLENYLKTFEDFYKYPLIYNKNE

Summary

Function
Plays a role in virus cell tropism, and may be required for efficient virus replication in macrophages.
Similarity
Belongs to the asfivirus MGF 100 family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Protein MGF 100-3L
Interpro
IPR036860   SH2_dom_sf
SUPFAM
SSF55550   SSF55550
PDB
2BBU     E-value=0.0895426,     Score=77

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
146
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00035
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11336
outside
1  -  146
 
 

Population Genetic Test Statistics

Pi
0.0676219
Theta
0.0717278
Tajima's D
-0.1696748
CLR
0.112548
Interpretation
Possibly Balancing Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62829.1
China_AnhuiXCGQ_2018 Protein
CAN10247.1
China_ASFV-SY18_2018 Protein
SPS73571.1
Poland_Pol16_20186_o7_2016-2017 Protein
CAN10247.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10247.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10247.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10247.1
Poland_Pol17_03029_C201_2016-2017 Protein
CAN10247.1
Poland_Pol17_04461_C210_2016-2017 Protein
CAN10247.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10247.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10247.1
Uganda_R8_2015 Protein
AXB49376.1
Uganda_R7_2015 Protein
AXB49550.1
Uganda_R25_2015 Protein
AXB49722.1
Uganda_N10_2015 Protein
AXB49893.1
Uganda_R35_2015 Protein
AXB50066.1
Estonia_2014 Protein
SPS73571.1
Italy_26544_OG10_2010 Protein
AJZ77157.1
Italy_47_Ss_2008_2008 Protein
AOO54523.1
Portugal_OURT_88.3_1988 Protein
CAN10497.1
Spain_E75_1975 Protein
CBH29249.1
Russia_Georgia_2007 Protein
CAN10247.1
Kenya_Tk1_2005 Protein
AJL34160.1
Kenya_Bus_2006 Protein
AJL34324.1
Russia_Odintsovo_2014 Protein
CAN10247.1
Portugal_L60_1960 Protein
AIY22339.1
Portugal_NHV_1968 Protein
AIY22497.1
Russia_Kashino_2013 Protein
CAN10247.1
Benin_1997 Protein
Protein
CAN10247.1
CAN10247.1
South_Africa_KNP_Pretorisuskop_1996 Protein
CAN10247.1
South_Africa_MGR_Mkuzi_1979 Protein
CAN10247.1
Malawi_Lil_1983    
Kenya_1950    
Namibia_Warthog_1980 Protein
CAN10247.1
South_Africa_Warmbaths_1987 Protein
CAN10247.1
Malawi_Tengani_1962 Protein
CAN10247.1
China_HLJ_2018 Protein
CAN10247.1
China_LN_2018 Protein
CAN10247.1
China_wbBS01_2018 Protein
CAN10247.1
Ukraine_Kyiv_2014 Protein
QED21768.1
Belgium_Etalle_wb_2018 Protein
QED90591.1
Lithuania_LT14_2014 Protein
QEY87954.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983 Protein
CAN10247.1
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