ASFVdb The African Swine Fever Virus Database
Strain
Kenya_1950 (Region: Kenya ;  Strain: Kenya 1950;  Date: 1950)
Gene
MGF 100-1R
Description
Annoated by sequence mapping,  MGF 100-1R
GenBank Accession
Full name
Protein MGF 100-1R      
 

Sequence

CDS
ATGGTTAGATTATTTTATAATCCGATAAAATACTTATTTTATCGTAGATCTTGTAAAAAAAGATTACGAAAGGCTTTAAAAAAGCTAAATTTTTATCATCCTCCAAAAGAATGTTGTCAAATATATCGTTTGCTAGAAAATGCTCCAGGGGGAACTTACTTTATTACAGAAAATATGACCAATGAGTTAATAATGATCGCCAAGGATCCGGTAGACAAAAAAATTAAAAGCGTTAAATTGTATCTTACTGGTAATTATATTAAGATTAATCAGCACTATTATATTAATATTTATATGTATCTTATGAGATATAACCAAATATATAAATATCCTTTAATTTGTTTTAGTAAATATTCAAAAATATTATAA
Protein
MVRLFYNPIKYLFYRRSCKKRLRKALKKLNFYHPPKECCQIYRLLENAPGGTYFITENMTNELIMIAKDPVDKKIKSVKLYLTGNYIKINQHYYINIYMYLMRYNQIYKYPLICFSKYSKILX

Summary

Function
Plays a role in virus cell tropism, and may be required for efficient virus replication in macrophages.
Similarity
Belongs to the asfivirus MGF 100 family.
Keywords
Complete proteome  
Feature
chain  Protein MGF 100-1R
PDB
6OKO     E-value=9.82302,     Score=59

Ontologies

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
123
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.6844
Exp number, first 60 AAs:
0.00176
Total prob of N-in:
0.20634
outside
1  -  123
 
 

Population Genetic Test Statistics

Pi
0.1408626
Theta
0.2270792
Tajima's D
-1.387871
CLR
1.14456
Interpretation
No evidence of Selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971    
China_AnhuiXCGQ_2018    
China_ASFV-SY18_2018    
Poland_Pol16_20186_o7_2016-2017    
Poland_Pol16_20538_o9_2016-2017    
Poland_Pol16_20540_o10_2016-2017    
Poland_Pol16_29413_o23_2016-2017    
Poland_Pol17_03029_C201_2016-2017    
Poland_Pol17_04461_C210_2016-2017    
Poland_Pol17_05838_C220_2016-2017    
Poland_ASFV_POL_Podlaskie_2015    
Uganda_R8_2015 Protein
AXB49234.1
Uganda_R7_2015 Protein
AXB49408.1
Uganda_R25_2015 Protein
AXB49581.1
Uganda_N10_2015 Protein
AXB49753.1
Uganda_R35_2015 Protein
AXB49924.1
Estonia_2014    
Italy_26544_OG10_2010    
Italy_47_Ss_2008_2008    
Portugal_OURT_88.3_1988    
Spain_E75_1975    
Russia_Georgia_2007    
Kenya_Tk1_2005 Protein
Protein
AJL34021.1
AJL34021.1
Kenya_Bus_2006 Protein
AJL34184.1
Russia_Odintsovo_2014    
Portugal_L60_1960    
Portugal_NHV_1968    
Russia_Kashino_2013    
Benin_1997    
South_Africa_KNP_Pretorisuskop_1996    
South_Africa_MGR_Mkuzi_1979    
Malawi_Lil_1983    
Kenya_1950 Protein
AJL34021.1
Namibia_Warthog_1980    
South_Africa_Warmbaths_1987    
Malawi_Tengani_1962    
China_HLJ_2018    
China_LN_2018    
China_wbBS01_2018    
Ukraine_Kyiv_2014    
Belgium_Etalle_wb_2018    
Lithuania_LT14_2014    
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
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