ASFVdb The African Swine Fever Virus Database
Strain
Portugal_OURT_88.3_1988 (Region: Portugal;  Strain: OURT 88/3;  Date: 1988)
Gene
pB475L
Description
Annotated in NCBI,  Putative product contains three overlapping leucine zippers
GenBank Accession
Full name
Uncharacterized protein B475L      
 

Sequence

CDS
ATGGATCAGGAAGAATCCCACGTTATAAGTATTTTTGAAACCCTTGGTGCGTATTTTATCAACATTTTTTATAACTTTTTATACAAAAATGCACTATACAAAAAACATTCCATTGTTACGGAATATCAGTATCAAGTAAAGGGCTATATTTTAGGGGTTAAACAAAATAAAAAACTTTATGAAAAAATGCTAGATAGTTTTTACAAATATTTTTGTAACATTACCCAAATTAACAGCAAAACATTAAACTTTTCAAACTTCATAACAACGATTGTTGATTCTTTCATACCTAAAGAATACAGCCAATCTATAAGCCTTGAAAAGAAAGAATCTATCTTGGAATTGCTACTGTGCGACTACATTAGCAATTTGGGCACCTTTATCACAACAGAAAAAATGCTGCCCTTTATTATCAAAAACCGGAAAGAAAACTACCATAAAGTTACGAAAGAAATGCAAGATTATAGTCTTACCTTTCTGCTCAAAAAAAGAATGGAACTATACAACAAATTTTTGCGAAAACAGGCCTATGTGGAGCCGGAGACAGAATTAGAAGAAACGTATGCAAGACTTAGTTCATACAATCGCAGCCTTCTTCATCAAATTGAAGAATTAACATCTGAAAAAAAGTCGCTCTTAGCGGATCTCTCCACGCTACGTAAAAAATATGAAAAAAGACAGAGTGAATACCGGCGACTTGTTCAACTCCTTTATCAGCAAATTCAACGCTCTTCTACATCAAAGAGCAGCTATCCACTCACAAAGTTTATTGAAACATTACCCTCTGAACATTTTTCTAATGAAGAATACCAAAAAGAGACACCGGCGGATCAAAAAGAAGTAGTAGAGATGGAATTATTGAGAAAACAAGAACTATTAACAAGCCAAGAGCTAACCAGCAAGTCACCAAACAATTATCCCGTGCCACATTCGAGGACTATAGTAAGTAAACCACCAGATAACTATCCTGTGCCACGATCTAGAACAACAACTAAACTAGATTTTGATAATTCTCTTCAAAACCAAGAACTTCACACTAAAAACGGATTTAGCGAGAAAGATATTGTTGAGTTTGGTCAGGATAAACCTGAGGAAGAAAATATTCTTGCGATTGATCAGGATAAACCTGAGGAAGAAAATATTCTTGCGATTAAACAGGATATACCTGAAGAAGAAAATATTCTTGCGATTGATCAGGATAAACCTGAGTTTAATCAAGATACACCTGAGTTTAAAGAAGCTGTTCTTGATACCAAAGAAAATATCCTTGAAGAAGAAAATCAAGATGAGCCTATTGTTCAAAATCCATTCTTGGAAAATTTTTGGAAACCTGAGCAGAAGACATTCAACCAGTCGGGCCTTTTTGAAGAATCTTCAAATTTTAGCAATGATTGGTCCGGCGGAGATGTAACTTTAAATTTTTCATAA
Protein
MDQEESHVISIFETLGAYFINIFYNFLYKNALYKKHSIVTEYQYQVKGYILGVKQNKKLYEKMLDSFYKYFCNITQINSKTLNFSNFITTIVDSFIPKEYSQSISLEKKESILELLLCDYISNLGTFITTEKMLPFIIKNRKENYHKVTKEMQDYSLTFLLKKRMELYNKFLRKQAYVEPETELEETYARLSSYNRSLLHQIEELTSEKKSLLADLSTLRKKYEKRQSEYRRLVQLLYQQIQRSSTSKSSYPLTKFIETLPSEHFSNEEYQKETPADQKEVVEMELLRKQELLTSQELTSKSPNNYPVPHSRTIVSKPPDNYPVPRSRTTTKLDFDNSLQNQELHTKNGFSEKDIVEFGQDKPEEENILAIDQDKPEEENILAIKQDIPEEENILAIDQDKPEFNQDTPEFKEAVLDTKENILEEENQDEPIVQNPFLENFWKPEQKTFNQSGLFEESSNFSNDWSGGDVTLNFS

Summary

Similarity
Belongs to the asfivirus B475L family.
Keywords
Coiled coil   Complete proteome   Glycoprotein   Host membrane   Membrane   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Uncharacterized protein B475L
PDB
3A5T     E-value=0.668038,     Score=77

Ontologies

KEGG

Subcellular Location

From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane  

Topology

Length:
475
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.32187
Exp number, first 60 AAs:
17.45179
Total prob of N-in:
0.68340
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  28
outside
29  -  475
 
 

Population Genetic Test Statistics

Pi
0.0350822
Theta
0.0500616
Tajima's D
-0.8951324
CLR
0
Interpretation
No evidence of Selection

Genomic alignment in the CDS region

 
 

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
Spain_BA71_1971 Protein
AKO62759.1
China_AnhuiXCGQ_2018 Protein
AYW34049.1
China_ASFV-SY18_2018 Protein
AKO62759.1
Poland_Pol16_20186_o7_2016-2017 Protein
AXZ95852.1
Poland_Pol16_20538_o9_2016-2017 Protein
CAN10177.1
Poland_Pol16_20540_o10_2016-2017 Protein
CAN10177.1
Poland_Pol16_29413_o23_2016-2017 Protein
CAN10177.1
Poland_Pol17_03029_C201_2016-2017 Protein
AXZ96040.1
Poland_Pol17_04461_C210_2016-2017 Protein
AXZ96135.1
Poland_Pol17_05838_C220_2016-2017 Protein
CAN10177.1
Poland_ASFV_POL_Podlaskie_2015 Protein
CAN10177.1
Uganda_R8_2015 Protein
AXB49306.1
Uganda_R7_2015 Protein
AXB49480.1
Uganda_R25_2015 Protein
AXB49652.1
Uganda_N10_2015 Protein
AXB49823.1
Uganda_R35_2015 Protein
AXB49996.1
Estonia_2014 Protein
SPS73501.1
Italy_26544_OG10_2010 Protein
AJZ77068.1
Italy_47_Ss_2008_2008 Protein
AOO54417.1
Portugal_OURT_88.3_1988 Protein
CAN10427.1
Spain_E75_1975 Protein
CBH29179.1
Russia_Georgia_2007 Protein
CBW46744.1
Kenya_Tk1_2005 Protein
AJL34091.1
Kenya_Bus_2006 Protein
AJL34256.1
Russia_Odintsovo_2014 Protein
CAN10177.1
Portugal_L60_1960 Protein
AIY22269.1
Portugal_NHV_1968 Protein
AIY22427.1
Russia_Kashino_2013 Protein
CAN10177.1
Benin_1997 Protein
Protein
CAN10177.1
CAN10177.1
South_Africa_KNP_Pretorisuskop_1996    
South_Africa_MGR_Mkuzi_1979 Protein
CAN10177.1
Malawi_Lil_1983 Protein
CAN10177.1
Kenya_1950 Protein
CAN10177.1
Namibia_Warthog_1980 Protein
CAN10177.1
South_Africa_Warmbaths_1987 Protein
CAN10177.1
Malawi_Tengani_1962 Protein
CAN10177.1
China_HLJ_2018 Protein
QBH90566.1
China_LN_2018 Protein
QBH90751.1
China_wbBS01_2018 Protein
QDL88109.1
Ukraine_Kyiv_2014    
Belgium_Etalle_wb_2018 Protein
QED90521.1
Lithuania_LT14_2014 Protein
QEY87884.1
South_Africa_1985    
South_Africa_2_2008    
Zambia_LIV_1983    
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